Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 AC005829.2-201ENST00000571422 1056 ntBASIC17.35■□□□□ 0.37
HIST1H3AP68431 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 TREX1-205ENST00000625293 1783 ntBASIC17.35■□□□□ 0.37
HIST1H3AP68431 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H3AP68431 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H3AP68431 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H3AP68431 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H3AP68431 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H3AP68431 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.33■□□□□ 0.37
HIST1H3AP68431 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H3AP68431 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H3AP68431 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.33■□□□□ 0.37
HIST1H3AP68431 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.33■□□□□ 0.37
HIST1H3AP68431 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H3AP68431 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H3AP68431 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H3AP68431 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H3AP68431 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H3AP68431 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H3AP68431 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H3AP68431 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.33■□□□□ 0.36
HIST1H3AP68431 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H3AP68431 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H3AP68431 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H3AP68431 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST1H3AP68431 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H3AP68431 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H3AP68431 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 AC097658.1-201ENST00000475555 843 ntBASIC17.32■□□□□ 0.36
HIST1H3AP68431 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H3AP68431 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H3AP68431 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
HIST1H3AP68431 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H3AP68431 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H3AP68431 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H3AP68431 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H3AP68431 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms