Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTA1P68133 AC004408.2-201ENST00000623613 2777 ntBASIC17.67■□□□□ 0.42
ACTA1P68133 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
ACTA1P68133 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTA1P68133 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.66■□□□□ 0.42
ACTA1P68133 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ACTA1P68133 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ACTA1P68133 KRT8P17-201ENST00000453110 1448 ntBASIC17.66■□□□□ 0.42
ACTA1P68133 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 KRT19P1-201ENST00000405746 1186 ntBASIC17.66■□□□□ 0.42
ACTA1P68133 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTA1P68133 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTA1P68133 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.66■□□□□ 0.42
ACTA1P68133 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTA1P68133 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTA1P68133 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.66■□□□□ 0.42
ACTA1P68133 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ACTA1P68133 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTA1P68133 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ACTA1P68133 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTA1P68133 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.65■□□□□ 0.42
ACTA1P68133 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTA1P68133 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTA1P68133 AC120498.9-201ENST00000339021 3867 ntBASIC17.65■□□□□ 0.42
ACTA1P68133 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTA1P68133 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTA1P68133 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTA1P68133 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTA1P68133 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTA1P68133 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTA1P68133 ZNRF2P3-201ENST00000424200 374 ntBASIC17.65■□□□□ 0.42
ACTA1P68133 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.65■□□□□ 0.42
ACTA1P68133 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTA1P68133 AL031963.3-201ENST00000606441 850 ntBASIC17.65■□□□□ 0.42
ACTA1P68133 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.65■□□□□ 0.42
ACTA1P68133 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
ACTA1P68133 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.65■□□□□ 0.42
ACTA1P68133 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.65■□□□□ 0.42
ACTA1P68133 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.65■□□□□ 0.42
ACTA1P68133 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTA1P68133 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ACTA1P68133 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ACTA1P68133 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ACTA1P68133 PTBP1P-201ENST00000554374 1601 ntBASIC17.65■□□□□ 0.42
ACTA1P68133 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
ACTA1P68133 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.64■□□□□ 0.42
ACTA1P68133 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
ACTA1P68133 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ACTA1P68133 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTA1P68133 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ACTA1P68133 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ACTA1P68133 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTA1P68133 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ACTA1P68133 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTA1P68133 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.64■□□□□ 0.41
ACTA1P68133 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTA1P68133 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTA1P68133 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTA1P68133 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTA1P68133 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTA1P68133 KRT8P20-201ENST00000423953 1409 ntBASIC17.64■□□□□ 0.41
ACTA1P68133 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTA1P68133 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.63■□□□□ 0.41
ACTA1P68133 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTA1P68133 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.63■□□□□ 0.41
ACTA1P68133 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.63■□□□□ 0.41
ACTA1P68133 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTA1P68133 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ACTA1P68133 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms