Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA52P62987 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA52P62987 POU5F1P3-201ENST00000428824 1078 ntBASIC17.04■□□□□ 0.32
UBA52P62987 RNA5SP413-201ENST00000516373 109 ntBASIC17.04■□□□□ 0.32
UBA52P62987 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.04■□□□□ 0.32
UBA52P62987 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBA52P62987 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBA52P62987 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBA52P62987 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.04■□□□□ 0.32
UBA52P62987 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
UBA52P62987 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
UBA52P62987 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBA52P62987 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 MKRN4P-201ENST00000444706 1521 ntBASIC17.03■□□□□ 0.32
UBA52P62987 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.03■□□□□ 0.32
UBA52P62987 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA52P62987 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.03■□□□□ 0.32
UBA52P62987 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 AC093827.2-201ENST00000512654 315 ntBASIC17.03■□□□□ 0.32
UBA52P62987 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA52P62987 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.03■□□□□ 0.32
UBA52P62987 AL034346.1-201ENST00000568244 1277 ntBASIC17.03■□□□□ 0.32
UBA52P62987 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.03■□□□□ 0.32
UBA52P62987 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UBA52P62987 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA52P62987 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBA52P62987 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBA52P62987 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 OR7E47P-201ENST00000546390 1422 ntBASIC17.03■□□□□ 0.32
UBA52P62987 AC068338.2-201ENST00000563278 1430 ntBASIC17.03■□□□□ 0.32
UBA52P62987 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UBA52P62987 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UBA52P62987 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA52P62987 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBA52P62987 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.02■□□□□ 0.32
UBA52P62987 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.02■□□□□ 0.32
UBA52P62987 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 KRT18P29-201ENST00000397031 1267 ntBASIC17.02■□□□□ 0.32
UBA52P62987 MIPEPP3-201ENST00000412105 444 ntBASIC17.02■□□□□ 0.32
UBA52P62987 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.02■□□□□ 0.32
UBA52P62987 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA52P62987 AC007322.4-201ENST00000509611 723 ntBASIC17.02■□□□□ 0.32
UBA52P62987 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.02■□□□□ 0.32
UBA52P62987 AC008687.6-201ENST00000596318 630 ntBASIC17.02■□□□□ 0.32
UBA52P62987 ITM2C-210ENST00000620962 501 ntBASIC17.02■□□□□ 0.32
UBA52P62987 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.02■□□□□ 0.32
UBA52P62987 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UBA52P62987 AC007225.1-201ENST00000566331 1836 ntBASIC17.02■□□□□ 0.31
UBA52P62987 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.02■□□□□ 0.31
UBA52P62987 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBA52P62987 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.02■□□□□ 0.31
UBA52P62987 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBA52P62987 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.02■□□□□ 0.31
UBA52P62987 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBA52P62987 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
UBA52P62987 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBA52P62987 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBA52P62987 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.01■□□□□ 0.31
UBA52P62987 NEFHP1-201ENST00000412845 2629 ntBASIC17.01■□□□□ 0.31
UBA52P62987 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms