Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP46P62068 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
USP46P62068 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
USP46P62068 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
USP46P62068 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 MIR718-201ENST00000390190 70 ntBASIC20.88■□□□□ 0.93
USP46P62068 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.88■□□□□ 0.93
USP46P62068 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP46P62068 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.88■□□□□ 0.93
USP46P62068 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
USP46P62068 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 RPS2P55-201ENST00000397318 883 ntBASIC20.87■□□□□ 0.93
USP46P62068 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP46P62068 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.87■□□□□ 0.93
USP46P62068 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.87■□□□□ 0.93
USP46P62068 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 AC107956.1-201ENST00000494359 873 ntBASIC20.87■□□□□ 0.93
USP46P62068 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.87■□□□□ 0.93
USP46P62068 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP46P62068 NBPF21P-201ENST00000425093 1451 ntBASIC20.87■□□□□ 0.93
USP46P62068 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP46P62068 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
USP46P62068 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 AC020907.5-201ENST00000624372 1936 ntBASIC20.86■□□□□ 0.93
USP46P62068 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
USP46P62068 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.86■□□□□ 0.93
USP46P62068 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.86■□□□□ 0.93
USP46P62068 SNORA78-201ENST00000459373 127 ntBASIC20.86■□□□□ 0.93
USP46P62068 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.86■□□□□ 0.93
USP46P62068 AC233702.5-201ENST00000584107 538 ntBASIC20.86■□□□□ 0.93
USP46P62068 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
USP46P62068 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
USP46P62068 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.86■□□□□ 0.93
USP46P62068 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP46P62068 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
USP46P62068 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.85■□□□□ 0.93
USP46P62068 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
USP46P62068 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.85■□□□□ 0.93
USP46P62068 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.85■□□□□ 0.93
USP46P62068 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
USP46P62068 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.85■□□□□ 0.93
USP46P62068 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.85■□□□□ 0.93
USP46P62068 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP46P62068 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
USP46P62068 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
USP46P62068 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.85■□□□□ 0.93
USP46P62068 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP46P62068 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms