Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN12P56749 FAM21FP-204ENST00000608637 956 ntBASIC17.24■□□□□ 0.35
CLDN12P56749 AC131212.1-201ENST00000613771 668 ntBASIC17.24■□□□□ 0.35
CLDN12P56749 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN12P56749 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLDN12P56749 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN12P56749 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN12P56749 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN12P56749 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN12P56749 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN12P56749 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN12P56749 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN12P56749 IRS3P-201ENST00000223076 1006 ntBASIC17.23■□□□□ 0.35
CLDN12P56749 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN12P56749 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN12P56749 AP001160.3-201ENST00000601484 763 ntBASIC17.23■□□□□ 0.35
CLDN12P56749 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN12P56749 AL358852.1-201ENST00000623174 1268 ntBASIC17.23■□□□□ 0.35
CLDN12P56749 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN12P56749 AL032819.2-201ENST00000624543 2162 ntBASIC17.23■□□□□ 0.35
CLDN12P56749 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN12P56749 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN12P56749 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CLDN12P56749 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN12P56749 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN12P56749 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN12P56749 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.22■□□□□ 0.35
CLDN12P56749 AL031432.3-201ENST00000607698 485 ntBASIC17.22■□□□□ 0.35
CLDN12P56749 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN12P56749 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN12P56749 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN12P56749 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN12P56749 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN12P56749 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 AC105265.2-201ENST00000467189 838 ntBASIC17.21■□□□□ 0.35
CLDN12P56749 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
CLDN12P56749 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN12P56749 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLDN12P56749 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN12P56749 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN12P56749 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN12P56749 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN12P56749 RBM17P2-201ENST00000616397 1405 ntBASIC17.21■□□□□ 0.34
CLDN12P56749 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLDN12P56749 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 AC008406.3-201ENST00000620001 1374 ntBASIC17.2■□□□□ 0.34
CLDN12P56749 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN12P56749 AC110285.6-201ENST00000617652 491 ntBASIC17.2■□□□□ 0.34
CLDN12P56749 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLDN12P56749 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN12P56749 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms