Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.31■□□□□ 0.52
PER3P56645 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.31■□□□□ 0.52
PER3P56645 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.31■□□□□ 0.52
PER3P56645 AC133681.1-201ENST00000465482 601 ntBASIC18.31■□□□□ 0.52
PER3P56645 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.31■□□□□ 0.52
PER3P56645 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.31■□□□□ 0.52
PER3P56645 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.31■□□□□ 0.52
PER3P56645 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.31■□□□□ 0.52
PER3P56645 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.31■□□□□ 0.52
PER3P56645 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.31■□□□□ 0.52
PER3P56645 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.31■□□□□ 0.52
PER3P56645 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.31■□□□□ 0.52
PER3P56645 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.31■□□□□ 0.52
PER3P56645 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.31■□□□□ 0.52
PER3P56645 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PER3P56645 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.3■□□□□ 0.52
PER3P56645 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PER3P56645 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PER3P56645 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PER3P56645 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PER3P56645 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.3■□□□□ 0.52
PER3P56645 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.3■□□□□ 0.52
PER3P56645 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PER3P56645 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.3■□□□□ 0.52
PER3P56645 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PER3P56645 AC105020.6-201ENST00000621523 1217 ntBASIC18.3■□□□□ 0.52
PER3P56645 AC087289.5-201ENST00000586076 3175 ntBASIC18.3■□□□□ 0.52
PER3P56645 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PER3P56645 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.3■□□□□ 0.52
PER3P56645 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.3■□□□□ 0.52
PER3P56645 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.3■□□□□ 0.52
PER3P56645 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.3■□□□□ 0.52
PER3P56645 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PER3P56645 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PER3P56645 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PER3P56645 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PER3P56645 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 CYP21A1P-202ENST00000354927 1481 ntBASIC18.29■□□□□ 0.52
PER3P56645 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
PER3P56645 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.29■□□□□ 0.52
PER3P56645 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.29■□□□□ 0.52
PER3P56645 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PER3P56645 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.29■□□□□ 0.52
PER3P56645 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PER3P56645 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PER3P56645 AC124016.1-201ENST00000609552 612 ntBASIC18.29■□□□□ 0.52
PER3P56645 AC110285.5-201ENST00000611501 352 ntBASIC18.29■□□□□ 0.52
PER3P56645 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
PER3P56645 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.29■□□□□ 0.52
PER3P56645 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PER3P56645 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.28■□□□□ 0.52
PER3P56645 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.28■□□□□ 0.52
PER3P56645 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PER3P56645 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.28■□□□□ 0.52
PER3P56645 AC087499.1-201ENST00000418141 1075 ntBASIC18.28■□□□□ 0.52
PER3P56645 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.28■□□□□ 0.52
PER3P56645 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PER3P56645 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms