Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 AP001271.2-201ENST00000624018 1556 ntBASIC19.61■□□□□ 0.73
CDKN2DP55273 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.61■□□□□ 0.73
CDKN2DP55273 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKN2DP55273 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKN2DP55273 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKN2DP55273 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKN2DP55273 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKN2DP55273 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2DP55273 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDKN2DP55273 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKN2DP55273 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDKN2DP55273 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.6■□□□□ 0.73
CDKN2DP55273 NCF1B-203ENST00000435988 1254 ntBASIC19.6■□□□□ 0.73
CDKN2DP55273 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDKN2DP55273 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKN2DP55273 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKN2DP55273 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKN2DP55273 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2DP55273 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDKN2DP55273 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKN2DP55273 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CDKN2DP55273 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKN2DP55273 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDKN2DP55273 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.59■□□□□ 0.73
CDKN2DP55273 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.59■□□□□ 0.73
CDKN2DP55273 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.59■□□□□ 0.73
CDKN2DP55273 DUSP5P2-201ENST00000426873 1033 ntBASIC19.59■□□□□ 0.73
CDKN2DP55273 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.59■□□□□ 0.73
CDKN2DP55273 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKN2DP55273 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKN2DP55273 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDKN2DP55273 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.59■□□□□ 0.73
CDKN2DP55273 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.59■□□□□ 0.73
CDKN2DP55273 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKN2DP55273 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.59■□□□□ 0.73
CDKN2DP55273 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CDKN2DP55273 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKN2DP55273 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDKN2DP55273 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDKN2DP55273 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKN2DP55273 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKN2DP55273 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKN2DP55273 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKN2DP55273 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKN2DP55273 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKN2DP55273 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
CDKN2DP55273 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDKN2DP55273 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.58■□□□□ 0.72
CDKN2DP55273 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKN2DP55273 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKN2DP55273 TSPY6P-201ENST00000448518 926 ntBASIC19.58■□□□□ 0.72
CDKN2DP55273 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKN2DP55273 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.58■□□□□ 0.72
CDKN2DP55273 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDKN2DP55273 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKN2DP55273 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.58■□□□□ 0.72
CDKN2DP55273 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDKN2DP55273 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKN2DP55273 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKN2DP55273 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDKN2DP55273 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDKN2DP55273 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDKN2DP55273 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.57■□□□□ 0.72
CDKN2DP55273 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKN2DP55273 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms