Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LIMK2P53671 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LIMK2P53671 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LIMK2P53671 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20■□□□□ 0.79
LIMK2P53671 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LIMK2P53671 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.99■□□□□ 0.79
LIMK2P53671 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.99■□□□□ 0.79
LIMK2P53671 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.99■□□□□ 0.79
LIMK2P53671 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.99■□□□□ 0.79
LIMK2P53671 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.99■□□□□ 0.79
LIMK2P53671 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.99■□□□□ 0.79
LIMK2P53671 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.99■□□□□ 0.79
LIMK2P53671 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.99■□□□□ 0.79
LIMK2P53671 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.99■□□□□ 0.79
LIMK2P53671 AC100791.3-201ENST00000617619 330 ntBASIC19.99■□□□□ 0.79
LIMK2P53671 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.99■□□□□ 0.79
LIMK2P53671 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
LIMK2P53671 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.99■□□□□ 0.79
LIMK2P53671 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.99■□□□□ 0.79
LIMK2P53671 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LIMK2P53671 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.99■□□□□ 0.79
LIMK2P53671 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.98■□□□□ 0.79
LIMK2P53671 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.98■□□□□ 0.79
LIMK2P53671 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LIMK2P53671 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.98■□□□□ 0.79
LIMK2P53671 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.98■□□□□ 0.79
LIMK2P53671 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.98■□□□□ 0.79
LIMK2P53671 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
LIMK2P53671 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.98■□□□□ 0.79
LIMK2P53671 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.98■□□□□ 0.79
LIMK2P53671 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 AC008687.6-201ENST00000596318 630 ntBASIC19.98■□□□□ 0.79
LIMK2P53671 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LIMK2P53671 PTBP1P-201ENST00000554374 1601 ntBASIC19.98■□□□□ 0.79
LIMK2P53671 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LIMK2P53671 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.97■□□□□ 0.79
LIMK2P53671 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LIMK2P53671 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.97■□□□□ 0.79
LIMK2P53671 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.97■□□□□ 0.79
LIMK2P53671 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.97■□□□□ 0.79
LIMK2P53671 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.97■□□□□ 0.79
LIMK2P53671 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LIMK2P53671 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.97■□□□□ 0.79
LIMK2P53671 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LIMK2P53671 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LIMK2P53671 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.96■□□□□ 0.79
LIMK2P53671 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
LIMK2P53671 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LIMK2P53671 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.96■□□□□ 0.79
LIMK2P53671 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.96■□□□□ 0.79
LIMK2P53671 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LIMK2P53671 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.96■□□□□ 0.79
LIMK2P53671 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LIMK2P53671 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK2P53671 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LIMK2P53671 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms