Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC25A1P53007 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC25A1P53007 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC25A1P53007 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC25A1P53007 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC25A1P53007 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC25A1P53007 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC25A1P53007 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC25A1P53007 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC25A1P53007 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC25A1P53007 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC25A1P53007 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC25A1P53007 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC25A1P53007 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC25A1P53007 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC25A1P53007 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
SLC25A1P53007 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SLC25A1P53007 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC25A1P53007 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC25A1P53007 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
SLC25A1P53007 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SLC25A1P53007 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC25A1P53007 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC25A1P53007 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SLC25A1P53007 AL512625.2-201ENST00000417533 625 ntBASIC17.62■□□□□ 0.41
SLC25A1P53007 AC026271.2-201ENST00000428091 497 ntBASIC17.62■□□□□ 0.41
SLC25A1P53007 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC25A1P53007 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC25A1P53007 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC25A1P53007 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC25A1P53007 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC25A1P53007 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC25A1P53007 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC25A1P53007 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC25A1P53007 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC25A1P53007 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC25A1P53007 AC087289.5-201ENST00000586076 3175 ntBASIC17.61■□□□□ 0.41
SLC25A1P53007 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SLC25A1P53007 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC25A1P53007 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.61■□□□□ 0.41
SLC25A1P53007 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC25A1P53007 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SLC25A1P53007 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SLC25A1P53007 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC25A1P53007 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC25A1P53007 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC25A1P53007 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC25A1P53007 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC25A1P53007 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC25A1P53007 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC25A1P53007 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.6■□□□□ 0.41
SLC25A1P53007 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC25A1P53007 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC25A1P53007 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC25A1P53007 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC25A1P53007 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC25A1P53007 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC25A1P53007 AC098818.2-201ENST00000564925 2320 ntBASIC17.6■□□□□ 0.41
SLC25A1P53007 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms