Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.06■□□□□ 0.96
LHX1P48742 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LHX1P48742 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LHX1P48742 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LHX1P48742 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LHX1P48742 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LHX1P48742 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.05■□□□□ 0.96
LHX1P48742 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LHX1P48742 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
LHX1P48742 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LHX1P48742 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LHX1P48742 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LHX1P48742 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.05■□□□□ 0.96
LHX1P48742 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.05■□□□□ 0.96
LHX1P48742 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LHX1P48742 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.05■□□□□ 0.96
LHX1P48742 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.05■□□□□ 0.96
LHX1P48742 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.05■□□□□ 0.96
LHX1P48742 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.05■□□□□ 0.96
LHX1P48742 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.05■□□□□ 0.96
LHX1P48742 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LHX1P48742 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LHX1P48742 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.05■□□□□ 0.96
LHX1P48742 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.04■□□□□ 0.96
LHX1P48742 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LHX1P48742 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 AC012618.2-201ENST00000428058 849 ntBASIC21.04■□□□□ 0.96
LHX1P48742 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.04■□□□□ 0.96
LHX1P48742 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LHX1P48742 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.04■□□□□ 0.96
LHX1P48742 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.04■□□□□ 0.96
LHX1P48742 Z99916.2-201ENST00000604037 246 ntBASIC21.04■□□□□ 0.96
LHX1P48742 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LHX1P48742 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.04■□□□□ 0.96
LHX1P48742 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.04■□□□□ 0.96
LHX1P48742 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.04■□□□□ 0.96
LHX1P48742 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LHX1P48742 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LHX1P48742 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LHX1P48742 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.03■□□□□ 0.96
LHX1P48742 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.03■□□□□ 0.96
LHX1P48742 RPS2P55-201ENST00000397318 883 ntBASIC21.03■□□□□ 0.96
LHX1P48742 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.03■□□□□ 0.96
LHX1P48742 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.03■□□□□ 0.96
LHX1P48742 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.03■□□□□ 0.96
LHX1P48742 AC107956.1-201ENST00000494359 873 ntBASIC21.03■□□□□ 0.96
LHX1P48742 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.03■□□□□ 0.96
LHX1P48742 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.03■□□□□ 0.96
LHX1P48742 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LHX1P48742 AC233702.5-201ENST00000584107 538 ntBASIC21.03■□□□□ 0.96
LHX1P48742 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LHX1P48742 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 AP001412.1-201ENST00000608405 714 ntBASIC21.03■□□□□ 0.96
LHX1P48742 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 AC092667.1-201ENST00000434301 2586 ntBASIC21.03■□□□□ 0.96
LHX1P48742 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.03■□□□□ 0.96
LHX1P48742 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.03■□□□□ 0.96
LHX1P48742 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
LHX1P48742 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LHX1P48742 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LHX1P48742 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX1P48742 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX1P48742 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LHX1P48742 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX1P48742 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX1P48742 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LHX1P48742 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LHX1P48742 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.02■□□□□ 0.96
LHX1P48742 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LHX1P48742 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.02■□□□□ 0.96
LHX1P48742 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX1P48742 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LHX1P48742 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.02■□□□□ 0.96
LHX1P48742 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LHX1P48742 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LHX1P48742 AP001271.2-201ENST00000624018 1556 ntBASIC21.02■□□□□ 0.95
LHX1P48742 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LHX1P48742 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
LHX1P48742 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LHX1P48742 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms