Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.04■□□□□ 0.8
CHRNA4P43681 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA4P43681 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA4P43681 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHRNA4P43681 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA4P43681 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA4P43681 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHRNA4P43681 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA4P43681 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CHRNA4P43681 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA4P43681 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA4P43681 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.03■□□□□ 0.8
CHRNA4P43681 PNMA6B-201ENST00000538162 1200 ntBASIC20.03■□□□□ 0.8
CHRNA4P43681 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.03■□□□□ 0.8
CHRNA4P43681 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHRNA4P43681 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA4P43681 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA4P43681 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA4P43681 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA4P43681 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA4P43681 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CHRNA4P43681 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.02■□□□□ 0.8
CHRNA4P43681 TMEM179-206ENST00000616017 1645 ntBASIC20.02■□□□□ 0.8
CHRNA4P43681 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CHRNA4P43681 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.02■□□□□ 0.8
CHRNA4P43681 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA4P43681 AL390719.1-204ENST00000412397 1219 ntBASIC20.02■□□□□ 0.8
CHRNA4P43681 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRNA4P43681 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRNA4P43681 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CHRNA4P43681 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.02■□□□□ 0.8
CHRNA4P43681 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.02■□□□□ 0.79
CHRNA4P43681 AL158211.5-201ENST00000623583 2518 ntBASIC20.02■□□□□ 0.79
CHRNA4P43681 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA4P43681 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA4P43681 PHGDH-210ENST00000641115 1638 ntBASIC20.02■□□□□ 0.79
CHRNA4P43681 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHRNA4P43681 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.02■□□□□ 0.79
CHRNA4P43681 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.01■□□□□ 0.79
CHRNA4P43681 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHRNA4P43681 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CHRNA4P43681 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.01■□□□□ 0.79
CHRNA4P43681 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.01■□□□□ 0.79
CHRNA4P43681 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA4P43681 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA4P43681 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.01■□□□□ 0.79
CHRNA4P43681 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CHRNA4P43681 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA4P43681 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA4P43681 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA4P43681 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.01■□□□□ 0.79
CHRNA4P43681 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.01■□□□□ 0.79
CHRNA4P43681 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
CHRNA4P43681 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CHRNA4P43681 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHRNA4P43681 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA4P43681 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA4P43681 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20■□□□□ 0.79
CHRNA4P43681 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CHRNA4P43681 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20■□□□□ 0.79
CHRNA4P43681 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA4P43681 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20■□□□□ 0.79
CHRNA4P43681 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CHRNA4P43681 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20■□□□□ 0.79
CHRNA4P43681 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHRNA4P43681 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA4P43681 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA4P43681 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA4P43681 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms