Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.67■□□□□ 0.9
LTBRP36941 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.67■□□□□ 0.9
LTBRP36941 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LTBRP36941 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTBRP36941 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTBRP36941 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTBRP36941 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTBRP36941 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LTBRP36941 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTBRP36941 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTBRP36941 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LTBRP36941 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.66■□□□□ 0.9
LTBRP36941 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.66■□□□□ 0.9
LTBRP36941 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
LTBRP36941 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
LTBRP36941 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTBRP36941 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.66■□□□□ 0.9
LTBRP36941 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTBRP36941 TFP1-202ENST00000475455 1573 ntBASIC20.66■□□□□ 0.9
LTBRP36941 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LTBRP36941 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.66■□□□□ 0.9
LTBRP36941 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTBRP36941 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.66■□□□□ 0.9
LTBRP36941 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.65■□□□□ 0.9
LTBRP36941 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTBRP36941 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.65■□□□□ 0.9
LTBRP36941 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.65■□□□□ 0.9
LTBRP36941 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LTBRP36941 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LTBRP36941 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.65■□□□□ 0.9
LTBRP36941 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTBRP36941 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTBRP36941 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LTBRP36941 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
LTBRP36941 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.65■□□□□ 0.9
LTBRP36941 TUBB8P6-201ENST00000436895 1288 ntBASIC20.65■□□□□ 0.9
LTBRP36941 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTBRP36941 HOMER2P1-201ENST00000455653 964 ntBASIC20.65■□□□□ 0.9
LTBRP36941 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.65■□□□□ 0.9
LTBRP36941 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.65■□□□□ 0.9
LTBRP36941 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.65■□□□□ 0.9
LTBRP36941 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.65■□□□□ 0.9
LTBRP36941 AL023803.3-201ENST00000615559 522 ntBASIC20.65■□□□□ 0.9
LTBRP36941 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.65■□□□□ 0.9
LTBRP36941 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LTBRP36941 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.64■□□□□ 0.9
LTBRP36941 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.64■□□□□ 0.9
LTBRP36941 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LTBRP36941 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LTBRP36941 AC116351.2-201ENST00000606540 1585 ntBASIC20.64■□□□□ 0.9
LTBRP36941 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LTBRP36941 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTBRP36941 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.64■□□□□ 0.89
LTBRP36941 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.64■□□□□ 0.89
LTBRP36941 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTBRP36941 AC004951.3-201ENST00000418645 1148 ntBASIC20.64■□□□□ 0.89
LTBRP36941 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTBRP36941 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LTBRP36941 AL671277.2-201ENST00000458060 996 ntBASIC20.64■□□□□ 0.89
LTBRP36941 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.64■□□□□ 0.89
LTBRP36941 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LTBRP36941 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LTBRP36941 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.64■□□□□ 0.89
LTBRP36941 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTBRP36941 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTBRP36941 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LTBRP36941 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LTBRP36941 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTBRP36941 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.63■□□□□ 0.89
LTBRP36941 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.63■□□□□ 0.89
LTBRP36941 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTBRP36941 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.63■□□□□ 0.89
LTBRP36941 AL359075.1-203ENST00000462729 1002 ntBASIC20.63■□□□□ 0.89
LTBRP36941 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.63■□□□□ 0.89
LTBRP36941 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.63■□□□□ 0.89
LTBRP36941 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.63■□□□□ 0.89
LTBRP36941 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.63■□□□□ 0.89
LTBRP36941 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.63■□□□□ 0.89
LTBRP36941 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LTBRP36941 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LTBRP36941 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
LTBRP36941 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LTBRP36941 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTBRP36941 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.63■□□□□ 0.89
LTBRP36941 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LTBRP36941 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.63■□□□□ 0.89
LTBRP36941 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
LTBRP36941 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTBRP36941 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LTBRP36941 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LTBRP36941 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LTBRP36941 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LTBRP36941 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LTBRP36941 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LTBRP36941 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.62■□□□□ 0.89
LTBRP36941 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LTBRP36941 AL441883.1-201ENST00000566170 1045 ntBASIC20.62■□□□□ 0.89
LTBRP36941 HLA-A-209ENST00000638375 975 ntBASIC20.62■□□□□ 0.89
LTBRP36941 AL031432.5-201ENST00000641059 760 ntBASIC20.62■□□□□ 0.89
LTBRP36941 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms