Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 FAM8A6P-201ENST00000407496 1135 ntBASIC25.05■■□□□ 1.6
RFC4P35249 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.05■■□□□ 1.6
RFC4P35249 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.05■■□□□ 1.6
RFC4P35249 KRT18P16-201ENST00000510337 1294 ntBASIC25.05■■□□□ 1.6
RFC4P35249 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.05■■□□□ 1.6
RFC4P35249 MYC-208ENST00000641036 567 ntBASIC25.05■■□□□ 1.6
RFC4P35249 AL024507.2-201ENST00000606070 2574 ntBASIC25.05■■□□□ 1.6
RFC4P35249 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
RFC4P35249 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.05■■□□□ 1.6
RFC4P35249 TFP1-202ENST00000475455 1573 ntBASIC25.05■■□□□ 1.6
RFC4P35249 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC4P35249 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC4P35249 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.04■■□□□ 1.6
RFC4P35249 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.04■■□□□ 1.6
RFC4P35249 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.04■■□□□ 1.6
RFC4P35249 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.04■■□□□ 1.6
RFC4P35249 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.04■■□□□ 1.6
RFC4P35249 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RFC4P35249 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RFC4P35249 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RFC4P35249 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC4P35249 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
RFC4P35249 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC4P35249 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.04■■□□□ 1.6
RFC4P35249 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC4P35249 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFC4P35249 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RFC4P35249 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
RFC4P35249 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
RFC4P35249 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFC4P35249 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFC4P35249 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.03■■□□□ 1.6
RFC4P35249 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
RFC4P35249 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFC4P35249 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.03■■□□□ 1.6
RFC4P35249 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
RFC4P35249 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
RFC4P35249 AL138966.2-201ENST00000621997 464 ntBASIC25.03■■□□□ 1.6
RFC4P35249 AC116562.4-202ENST00000641738 218 ntBASIC25.03■■□□□ 1.6
RFC4P35249 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
RFC4P35249 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFC4P35249 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
RFC4P35249 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.02■■□□□ 1.6
RFC4P35249 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.02■■□□□ 1.6
RFC4P35249 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
RFC4P35249 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RFC4P35249 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.02■■□□□ 1.6
RFC4P35249 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.02■■□□□ 1.6
RFC4P35249 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
RFC4P35249 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.02■■□□□ 1.6
RFC4P35249 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.02■■□□□ 1.6
RFC4P35249 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RFC4P35249 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
RFC4P35249 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
RFC4P35249 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFC4P35249 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RFC4P35249 RCC2P6-201ENST00000526625 1557 ntBASIC25.01■■□□□ 1.59
RFC4P35249 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFC4P35249 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFC4P35249 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RFC4P35249 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RFC4P35249 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFC4P35249 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFC4P35249 KRT18P56-201ENST00000507275 550 ntBASIC25.01■■□□□ 1.59
RFC4P35249 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.01■■□□□ 1.59
RFC4P35249 AC011298.2-201ENST00000617989 482 ntBASIC25.01■■□□□ 1.59
RFC4P35249 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFC4P35249 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.01■■□□□ 1.59
RFC4P35249 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.01■■□□□ 1.59
RFC4P35249 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC25.01■■□□□ 1.59
RFC4P35249 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25■■□□□ 1.59
RFC4P35249 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFC4P35249 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFC4P35249 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFC4P35249 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25■■□□□ 1.59
RFC4P35249 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
RFC4P35249 TSPY5P-201ENST00000426936 936 ntBASIC25■■□□□ 1.59
RFC4P35249 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25■■□□□ 1.59
RFC4P35249 YBX1P2-201ENST00000489612 999 ntBASIC25■■□□□ 1.59
RFC4P35249 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RFC4P35249 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25■■□□□ 1.59
RFC4P35249 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFC4P35249 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RFC4P35249 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFC4P35249 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
RFC4P35249 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25■■□□□ 1.59
RFC4P35249 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms