Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A4P31645 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A4P31645 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC6A4P31645 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A4P31645 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A4P31645 TFP1-202ENST00000475455 1573 ntBASIC20.42■□□□□ 0.86
SLC6A4P31645 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SLC6A4P31645 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC6A4P31645 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC6A4P31645 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SLC6A4P31645 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC6A4P31645 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC6A4P31645 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC6A4P31645 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC6A4P31645 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC6A4P31645 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A4P31645 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC6A4P31645 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC6A4P31645 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC6A4P31645 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SLC6A4P31645 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A4P31645 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC6A4P31645 AL691432.2-201ENST00000607222 2038 ntBASIC20.39■□□□□ 0.86
SLC6A4P31645 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC6A4P31645 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC6A4P31645 AC099778.1-201ENST00000568593 1911 ntBASIC20.39■□□□□ 0.86
SLC6A4P31645 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC6A4P31645 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SLC6A4P31645 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A4P31645 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A4P31645 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC6A4P31645 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SLC6A4P31645 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A4P31645 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A4P31645 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC6A4P31645 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.39■□□□□ 0.85
SLC6A4P31645 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A4P31645 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A4P31645 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A4P31645 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC6A4P31645 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.39■□□□□ 0.85
SLC6A4P31645 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC6A4P31645 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A4P31645 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC6A4P31645 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC6A4P31645 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC6A4P31645 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.38■□□□□ 0.85
SLC6A4P31645 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SLC6A4P31645 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC6A4P31645 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC6A4P31645 AL596275.1-201ENST00000423464 877 ntBASIC20.38■□□□□ 0.85
SLC6A4P31645 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC6A4P31645 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.38■□□□□ 0.85
SLC6A4P31645 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SLC6A4P31645 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC6A4P31645 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC6A4P31645 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SLC6A4P31645 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC6A4P31645 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC6A4P31645 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A4P31645 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SLC6A4P31645 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms