Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 MIR4785-201ENST00000585005 73 ntBASIC20.21■□□□□ 0.83
HLA-FP30511 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-FP30511 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-FP30511 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-FP30511 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HLA-FP30511 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-FP30511 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-FP30511 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-FP30511 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
HLA-FP30511 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-FP30511 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-FP30511 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-FP30511 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-FP30511 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HLA-FP30511 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.2■□□□□ 0.82
HLA-FP30511 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.2■□□□□ 0.82
HLA-FP30511 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-FP30511 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-FP30511 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HLA-FP30511 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-FP30511 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-FP30511 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.19■□□□□ 0.82
HLA-FP30511 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-FP30511 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-FP30511 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-FP30511 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.19■□□□□ 0.82
HLA-FP30511 CD177P1-201ENST00000606252 935 ntBASIC20.19■□□□□ 0.82
HLA-FP30511 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-FP30511 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-FP30511 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.19■□□□□ 0.82
HLA-FP30511 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-FP30511 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HLA-FP30511 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HLA-FP30511 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-FP30511 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-FP30511 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HLA-FP30511 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HLA-FP30511 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.18■□□□□ 0.82
HLA-FP30511 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 TSPY15P-201ENST00000457163 923 ntBASIC20.18■□□□□ 0.82
HLA-FP30511 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-FP30511 AL353708.3-201ENST00000610272 989 ntBASIC20.18■□□□□ 0.82
HLA-FP30511 AC073912.3-201ENST00000624414 853 ntBASIC20.18■□□□□ 0.82
HLA-FP30511 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
HLA-FP30511 AL512408.1-201ENST00000569378 2000 ntBASIC20.18■□□□□ 0.82
HLA-FP30511 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-FP30511 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-FP30511 FEM1AP1-201ENST00000431297 1995 ntBASIC20.17■□□□□ 0.82
HLA-FP30511 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
HLA-FP30511 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HLA-FP30511 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HLA-FP30511 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 FAM197Y1-201ENST00000421178 764 ntBASIC20.17■□□□□ 0.82
HLA-FP30511 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-FP30511 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 AC073195.1-201ENST00000607241 877 ntBASIC20.17■□□□□ 0.82
HLA-FP30511 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-FP30511 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-FP30511 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HLA-FP30511 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
HLA-FP30511 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-FP30511 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-FP30511 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-FP30511 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-FP30511 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-FP30511 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-FP30511 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-FP30511 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-FP30511 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-FP30511 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HLA-FP30511 AP002982.1-201ENST00000492365 877 ntBASIC20.16■□□□□ 0.82
HLA-FP30511 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-FP30511 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-FP30511 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-FP30511 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms