Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.97■□□□□ 0.63
HTR1EP28566 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HTR1EP28566 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HTR1EP28566 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HTR1EP28566 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HTR1EP28566 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.97■□□□□ 0.63
HTR1EP28566 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1EP28566 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1EP28566 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTR1EP28566 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.97■□□□□ 0.63
HTR1EP28566 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HTR1EP28566 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.96■□□□□ 0.63
HTR1EP28566 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.96■□□□□ 0.63
HTR1EP28566 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HTR1EP28566 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.96■□□□□ 0.63
HTR1EP28566 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 AC004408.2-201ENST00000623613 2777 ntBASIC18.96■□□□□ 0.63
HTR1EP28566 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.96■□□□□ 0.63
HTR1EP28566 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HTR1EP28566 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.96■□□□□ 0.63
HTR1EP28566 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
HTR1EP28566 CNN2P6-201ENST00000439038 900 ntBASIC18.96■□□□□ 0.63
HTR1EP28566 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.96■□□□□ 0.63
HTR1EP28566 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.96■□□□□ 0.63
HTR1EP28566 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HTR1EP28566 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.96■□□□□ 0.63
HTR1EP28566 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.96■□□□□ 0.63
HTR1EP28566 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.96■□□□□ 0.63
HTR1EP28566 MIR4758-201ENST00000577688 71 ntBASIC18.96■□□□□ 0.63
HTR1EP28566 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HTR1EP28566 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.96■□□□□ 0.63
HTR1EP28566 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.96■□□□□ 0.63
HTR1EP28566 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HTR1EP28566 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTR1EP28566 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HTR1EP28566 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HTR1EP28566 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.95■□□□□ 0.62
HTR1EP28566 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HTR1EP28566 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HTR1EP28566 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HTR1EP28566 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HTR1EP28566 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.95■□□□□ 0.62
HTR1EP28566 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HTR1EP28566 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.95■□□□□ 0.62
HTR1EP28566 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.95■□□□□ 0.62
HTR1EP28566 AC010141.2-201ENST00000452426 721 ntBASIC18.95■□□□□ 0.62
HTR1EP28566 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
HTR1EP28566 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HTR1EP28566 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HTR1EP28566 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.95■□□□□ 0.62
HTR1EP28566 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HTR1EP28566 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HTR1EP28566 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.95■□□□□ 0.62
HTR1EP28566 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HTR1EP28566 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HTR1EP28566 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.94■□□□□ 0.62
HTR1EP28566 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HTR1EP28566 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
HTR1EP28566 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.94■□□□□ 0.62
HTR1EP28566 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 Z82202.1-201ENST00000623446 1880 ntBASIC18.94■□□□□ 0.62
HTR1EP28566 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
HTR1EP28566 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTR1EP28566 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.93■□□□□ 0.62
HTR1EP28566 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HTR1EP28566 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.93■□□□□ 0.62
HTR1EP28566 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
HTR1EP28566 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.93■□□□□ 0.62
HTR1EP28566 AC010536.3-201ENST00000620306 533 ntBASIC18.93■□□□□ 0.62
HTR1EP28566 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.93■□□□□ 0.62
HTR1EP28566 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HTR1EP28566 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTR1EP28566 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms