Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPN3P26045 AC142086.2-201ENST00000569753 217 ntBASIC20.25■□□□□ 0.83
PTPN3P26045 AC083880.1-201ENST00000608266 535 ntBASIC20.25■□□□□ 0.83
PTPN3P26045 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN3P26045 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PTPN3P26045 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 AL158211.5-201ENST00000623583 2518 ntBASIC20.24■□□□□ 0.83
PTPN3P26045 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN3P26045 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 AC073210.2-201ENST00000430369 194 ntBASIC20.24■□□□□ 0.83
PTPN3P26045 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPN3P26045 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
PTPN3P26045 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN3P26045 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN3P26045 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 AP001271.2-201ENST00000624018 1556 ntBASIC20.24■□□□□ 0.83
PTPN3P26045 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN3P26045 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN3P26045 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN3P26045 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
PTPN3P26045 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN3P26045 AL390719.1-204ENST00000412397 1219 ntBASIC20.23■□□□□ 0.83
PTPN3P26045 AC069152.1-201ENST00000438030 544 ntBASIC20.23■□□□□ 0.83
PTPN3P26045 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN3P26045 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN3P26045 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PTPN3P26045 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PTPN3P26045 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN3P26045 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN3P26045 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN3P26045 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN3P26045 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN3P26045 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN3P26045 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN3P26045 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN3P26045 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN3P26045 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN3P26045 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN3P26045 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTPN3P26045 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
PTPN3P26045 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN3P26045 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN3P26045 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTPN3P26045 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN3P26045 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN3P26045 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTPN3P26045 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTPN3P26045 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN3P26045 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN3P26045 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN3P26045 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 HLA-L-209ENST00000420110 1011 ntBASIC20.21■□□□□ 0.83
PTPN3P26045 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTPN3P26045 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPN3P26045 AC006557.6-201ENST00000623071 864 ntBASIC20.21■□□□□ 0.83
PTPN3P26045 HLA-B-256ENST00000639848 1089 ntBASIC20.21■□□□□ 0.83
PTPN3P26045 AC133041.1-202ENST00000642053 222 ntBASIC20.21■□□□□ 0.83
PTPN3P26045 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN3P26045 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN3P26045 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN3P26045 TREX1-205ENST00000625293 1783 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms