Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL049637.2-201ENST00000641778 930 ntBASIC17.14■□□□□ 0.33
CD40P25942 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.14■□□□□ 0.33
CD40P25942 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CD40P25942 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD40P25942 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CD40P25942 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.13■□□□□ 0.33
CD40P25942 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.13■□□□□ 0.33
CD40P25942 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.13■□□□□ 0.33
CD40P25942 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 AC116351.2-201ENST00000606540 1585 ntBASIC17.13■□□□□ 0.33
CD40P25942 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 HTR7P1-201ENST00000538670 1336 ntBASIC17.13■□□□□ 0.33
CD40P25942 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.13■□□□□ 0.33
CD40P25942 AC020907.5-201ENST00000624372 1936 ntBASIC17.13■□□□□ 0.33
CD40P25942 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CD40P25942 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD40P25942 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.12■□□□□ 0.33
CD40P25942 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CD40P25942 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CD40P25942 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.12■□□□□ 0.33
CD40P25942 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.12■□□□□ 0.33
CD40P25942 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.12■□□□□ 0.33
CD40P25942 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.12■□□□□ 0.33
CD40P25942 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CD40P25942 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.12■□□□□ 0.33
CD40P25942 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD40P25942 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CD40P25942 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD40P25942 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CD40P25942 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.11■□□□□ 0.33
CD40P25942 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 AL353807.1-201ENST00000427475 662 ntBASIC17.11■□□□□ 0.33
CD40P25942 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.11■□□□□ 0.33
CD40P25942 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.11■□□□□ 0.33
CD40P25942 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.11■□□□□ 0.33
CD40P25942 AC113410.3-201ENST00000623366 203 ntBASIC17.11■□□□□ 0.33
CD40P25942 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.11■□□□□ 0.33
CD40P25942 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CD40P25942 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.11■□□□□ 0.33
CD40P25942 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.11■□□□□ 0.33
CD40P25942 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 AC018553.1-201ENST00000616682 1458 ntBASIC17.11■□□□□ 0.33
CD40P25942 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD40P25942 AP006587.1-201ENST00000534129 1502 ntBASIC17.11■□□□□ 0.33
CD40P25942 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CD40P25942 PHGDH-210ENST00000641115 1638 ntBASIC17.1■□□□□ 0.33
CD40P25942 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CD40P25942 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD40P25942 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD40P25942 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD40P25942 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
CD40P25942 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD40P25942 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CD40P25942 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.1■□□□□ 0.33
CD40P25942 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD40P25942 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CD40P25942 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.1■□□□□ 0.33
CD40P25942 TSPY7P-201ENST00000431358 1114 ntBASIC17.1■□□□□ 0.33
CD40P25942 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms