Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCK1P16333 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCK1P16333 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCK1P16333 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
NCK1P16333 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NCK1P16333 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NCK1P16333 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NCK1P16333 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.72■□□□□ 0.59
NCK1P16333 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.72■□□□□ 0.59
NCK1P16333 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.72■□□□□ 0.59
NCK1P16333 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.72■□□□□ 0.59
NCK1P16333 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.72■□□□□ 0.59
NCK1P16333 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NCK1P16333 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NCK1P16333 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NCK1P16333 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.72■□□□□ 0.59
NCK1P16333 AC009237.14-201ENST00000609975 1594 ntBASIC18.72■□□□□ 0.59
NCK1P16333 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCK1P16333 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NCK1P16333 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.71■□□□□ 0.59
NCK1P16333 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.71■□□□□ 0.59
NCK1P16333 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
NCK1P16333 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 KRT18P20-201ENST00000548986 1279 ntBASIC18.71■□□□□ 0.59
NCK1P16333 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.71■□□□□ 0.59
NCK1P16333 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 AL356652.1-201ENST00000615962 565 ntBASIC18.71■□□□□ 0.59
NCK1P16333 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NCK1P16333 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NCK1P16333 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCK1P16333 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
NCK1P16333 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NCK1P16333 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.7■□□□□ 0.58
NCK1P16333 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
NCK1P16333 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NCK1P16333 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NCK1P16333 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
NCK1P16333 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.7■□□□□ 0.58
NCK1P16333 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NCK1P16333 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NCK1P16333 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 AC020763.4-201ENST00000623414 4170 ntBASIC18.69■□□□□ 0.58
NCK1P16333 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
NCK1P16333 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.69■□□□□ 0.58
NCK1P16333 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.69■□□□□ 0.58
NCK1P16333 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NCK1P16333 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 AC027612.3-201ENST00000413684 1047 ntBASIC18.69■□□□□ 0.58
NCK1P16333 CDV3P1-201ENST00000471403 739 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms