Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL4P13236 AL031985.4-201ENST00000642138 673 ntBASIC18.8■□□□□ 0.6
CCL4P13236 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL4P13236 TFP1-202ENST00000475455 1573 ntBASIC18.8■□□□□ 0.6
CCL4P13236 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.8■□□□□ 0.6
CCL4P13236 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCL4P13236 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCL4P13236 KRT18P22-201ENST00000402024 1347 ntBASIC18.79■□□□□ 0.6
CCL4P13236 AC018553.1-201ENST00000616682 1458 ntBASIC18.79■□□□□ 0.6
CCL4P13236 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL4P13236 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL4P13236 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL4P13236 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL4P13236 AC113347.1-201ENST00000413321 391 ntBASIC18.79■□□□□ 0.6
CCL4P13236 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL4P13236 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.79■□□□□ 0.6
CCL4P13236 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL4P13236 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL4P13236 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.79■□□□□ 0.6
CCL4P13236 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCL4P13236 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL4P13236 KRT16P6-202ENST00000425692 1426 ntBASIC18.79■□□□□ 0.6
CCL4P13236 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL4P13236 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL4P13236 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCL4P13236 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL4P13236 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCL4P13236 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL4P13236 MESTP1-201ENST00000404287 994 ntBASIC18.78■□□□□ 0.6
CCL4P13236 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.78■□□□□ 0.6
CCL4P13236 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL4P13236 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL4P13236 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.78■□□□□ 0.6
CCL4P13236 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL4P13236 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.78■□□□□ 0.6
CCL4P13236 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL4P13236 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL4P13236 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCL4P13236 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL4P13236 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCL4P13236 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL4P13236 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCL4P13236 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCL4P13236 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCL4P13236 LINC00565-201ENST00000562710 2331 ntBASIC18.77■□□□□ 0.6
CCL4P13236 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL4P13236 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.77■□□□□ 0.6
CCL4P13236 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.77■□□□□ 0.6
CCL4P13236 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.77■□□□□ 0.6
CCL4P13236 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.77■□□□□ 0.6
CCL4P13236 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.77■□□□□ 0.6
CCL4P13236 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL4P13236 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.77■□□□□ 0.6
CCL4P13236 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL4P13236 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.77■□□□□ 0.6
CCL4P13236 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.77■□□□□ 0.6
CCL4P13236 AL445675.2-201ENST00000620291 557 ntBASIC18.77■□□□□ 0.6
CCL4P13236 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL4P13236 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCL4P13236 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCL4P13236 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.77■□□□□ 0.6
CCL4P13236 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCL4P13236 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCL4P13236 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 AC092720.2-201ENST00000602388 1665 ntBASIC18.76■□□□□ 0.59
CCL4P13236 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCL4P13236 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.76■□□□□ 0.59
CCL4P13236 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.76■□□□□ 0.59
CCL4P13236 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 TERF1P1-201ENST00000311003 1181 ntBASIC18.76■□□□□ 0.59
CCL4P13236 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 AL137013.1-201ENST00000432946 1228 ntBASIC18.76■□□□□ 0.59
CCL4P13236 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CCL4P13236 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCL4P13236 AL590326.2-201ENST00000625139 305 ntBASIC18.76■□□□□ 0.59
CCL4P13236 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.76■□□□□ 0.59
CCL4P13236 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.76■□□□□ 0.59
CCL4P13236 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL4P13236 FSCN1P1-201ENST00000568912 1481 ntBASIC18.76■□□□□ 0.59
CCL4P13236 AC079834.2-201ENST00000609776 1949 ntBASIC18.76■□□□□ 0.59
CCL4P13236 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms