Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT3P12035 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT3P12035 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT3P12035 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
KRT3P12035 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
KRT3P12035 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT3P12035 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT3P12035 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KRT3P12035 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT3P12035 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
KRT3P12035 AC073210.2-201ENST00000430369 194 ntBASIC20.9■□□□□ 0.94
KRT3P12035 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT3P12035 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.9■□□□□ 0.94
KRT3P12035 AC098934.4-201ENST00000564127 592 ntBASIC20.9■□□□□ 0.94
KRT3P12035 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
KRT3P12035 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.9■□□□□ 0.94
KRT3P12035 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KRT3P12035 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT3P12035 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT3P12035 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
KRT3P12035 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT3P12035 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRT3P12035 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT3P12035 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KRT3P12035 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT3P12035 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT3P12035 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT3P12035 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT3P12035 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT3P12035 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT3P12035 AL390719.1-204ENST00000412397 1219 ntBASIC20.89■□□□□ 0.93
KRT3P12035 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.89■□□□□ 0.93
KRT3P12035 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.89■□□□□ 0.93
KRT3P12035 AC142086.2-201ENST00000569753 217 ntBASIC20.89■□□□□ 0.93
KRT3P12035 AC005829.2-201ENST00000571422 1056 ntBASIC20.89■□□□□ 0.93
KRT3P12035 AC133041.1-202ENST00000642053 222 ntBASIC20.89■□□□□ 0.93
KRT3P12035 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT3P12035 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.89■□□□□ 0.93
KRT3P12035 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
KRT3P12035 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT3P12035 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
KRT3P12035 AC125437.2-201ENST00000625180 2167 ntBASIC20.88■□□□□ 0.93
KRT3P12035 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 AC069152.1-201ENST00000438030 544 ntBASIC20.88■□□□□ 0.93
KRT3P12035 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.88■□□□□ 0.93
KRT3P12035 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT3P12035 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KRT3P12035 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT3P12035 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KRT3P12035 AC009237.14-201ENST00000609975 1594 ntBASIC20.88■□□□□ 0.93
KRT3P12035 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT3P12035 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KRT3P12035 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT3P12035 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT3P12035 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT3P12035 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
KRT3P12035 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
KRT3P12035 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT3P12035 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT3P12035 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT3P12035 HLA-L-209ENST00000420110 1011 ntBASIC20.87■□□□□ 0.93
KRT3P12035 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KRT3P12035 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.87■□□□□ 0.93
KRT3P12035 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT3P12035 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.87■□□□□ 0.93
KRT3P12035 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT3P12035 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT3P12035 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT3P12035 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT3P12035 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms