Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 HLA-G-202ENST00000376815 851 ntBASIC15.71■□□□□ 0.11
PF4V1P10720 HLA-G-203ENST00000376818 1127 ntBASIC15.71■□□□□ 0.11
PF4V1P10720 AL596275.1-201ENST00000423464 877 ntBASIC15.71■□□□□ 0.11
PF4V1P10720 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.71■□□□□ 0.11
PF4V1P10720 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.71■□□□□ 0.11
PF4V1P10720 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.71■□□□□ 0.11
PF4V1P10720 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.71■□□□□ 0.11
PF4V1P10720 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.71■□□□□ 0.11
PF4V1P10720 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.71■□□□□ 0.11
PF4V1P10720 RN7SL471P-201ENST00000580476 299 ntBASIC15.71■□□□□ 0.11
PF4V1P10720 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.71■□□□□ 0.11
PF4V1P10720 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.71■□□□□ 0.11
PF4V1P10720 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PF4V1P10720 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.71■□□□□ 0.11
PF4V1P10720 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
PF4V1P10720 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PF4V1P10720 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.7■□□□□ 0.1
PF4V1P10720 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PF4V1P10720 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.7■□□□□ 0.1
PF4V1P10720 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PF4V1P10720 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PF4V1P10720 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PF4V1P10720 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PF4V1P10720 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PF4V1P10720 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PF4V1P10720 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PF4V1P10720 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.7■□□□□ 0.1
PF4V1P10720 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PF4V1P10720 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PF4V1P10720 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.7■□□□□ 0.1
PF4V1P10720 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PF4V1P10720 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PF4V1P10720 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
PF4V1P10720 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PF4V1P10720 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.69■□□□□ 0.1
PF4V1P10720 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.69■□□□□ 0.1
PF4V1P10720 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PF4V1P10720 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PF4V1P10720 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PF4V1P10720 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PF4V1P10720 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PF4V1P10720 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.69■□□□□ 0.1
PF4V1P10720 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.69■□□□□ 0.1
PF4V1P10720 AC006557.6-201ENST00000623071 864 ntBASIC15.69■□□□□ 0.1
PF4V1P10720 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.69■□□□□ 0.1
PF4V1P10720 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.69■□□□□ 0.1
PF4V1P10720 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PF4V1P10720 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 AC020907.5-201ENST00000624372 1936 ntBASIC15.68■□□□□ 0.1
PF4V1P10720 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 AC073314.1-201ENST00000568729 2216 ntBASIC15.68■□□□□ 0.1
PF4V1P10720 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.68■□□□□ 0.1
PF4V1P10720 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 SMG8-203ENST00000578922 2178 ntBASIC15.68■□□□□ 0.1
PF4V1P10720 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.68■□□□□ 0.1
PF4V1P10720 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.68■□□□□ 0.1
PF4V1P10720 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.68■□□□□ 0.1
PF4V1P10720 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.68■□□□□ 0.1
PF4V1P10720 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.68■□□□□ 0.1
PF4V1P10720 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.68■□□□□ 0.1
PF4V1P10720 AC233263.1-201ENST00000578059 224 ntBASIC15.68■□□□□ 0.1
PF4V1P10720 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.68■□□□□ 0.1
PF4V1P10720 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PF4V1P10720 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms