Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD48P09326 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD48P09326 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD48P09326 AC007952.6-201ENST00000573168 2673 ntBASIC20.58■□□□□ 0.89
CD48P09326 AC003957.1-201ENST00000625108 2673 ntBASIC20.58■□□□□ 0.89
CD48P09326 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD48P09326 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CD48P09326 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.58■□□□□ 0.89
CD48P09326 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CD48P09326 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.58■□□□□ 0.89
CD48P09326 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.58■□□□□ 0.89
CD48P09326 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD48P09326 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD48P09326 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD48P09326 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD48P09326 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD48P09326 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CD48P09326 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD48P09326 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD48P09326 AC116562.4-201ENST00000641316 2276 ntBASIC20.57■□□□□ 0.88
CD48P09326 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.57■□□□□ 0.88
CD48P09326 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.57■□□□□ 0.88
CD48P09326 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CD48P09326 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.57■□□□□ 0.88
CD48P09326 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.57■□□□□ 0.88
CD48P09326 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD48P09326 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CD48P09326 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD48P09326 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD48P09326 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD48P09326 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.57■□□□□ 0.88
CD48P09326 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.57■□□□□ 0.88
CD48P09326 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.57■□□□□ 0.88
CD48P09326 AL109923.1-201ENST00000618799 583 ntBASIC20.57■□□□□ 0.88
CD48P09326 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.57■□□□□ 0.88
CD48P09326 MYC-209ENST00000641252 345 ntBASIC20.57■□□□□ 0.88
CD48P09326 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CD48P09326 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.57■□□□□ 0.88
CD48P09326 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CD48P09326 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.57■□□□□ 0.88
CD48P09326 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CD48P09326 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD48P09326 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 PHGDH-210ENST00000641115 1638 ntBASIC20.56■□□□□ 0.88
CD48P09326 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.56■□□□□ 0.88
CD48P09326 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.56■□□□□ 0.88
CD48P09326 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.56■□□□□ 0.88
CD48P09326 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.56■□□□□ 0.88
CD48P09326 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.56■□□□□ 0.88
CD48P09326 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CD48P09326 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD48P09326 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CD48P09326 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.55■□□□□ 0.88
CD48P09326 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.55■□□□□ 0.88
CD48P09326 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.55■□□□□ 0.88
CD48P09326 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.55■□□□□ 0.88
CD48P09326 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.55■□□□□ 0.88
CD48P09326 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.55■□□□□ 0.88
CD48P09326 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 MIR4758-201ENST00000577688 71 ntBASIC20.55■□□□□ 0.88
CD48P09326 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.55■□□□□ 0.88
CD48P09326 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.55■□□□□ 0.88
CD48P09326 AC104771.1-201ENST00000603335 964 ntBASIC20.55■□□□□ 0.88
CD48P09326 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.55■□□□□ 0.88
CD48P09326 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CD48P09326 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CD48P09326 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.55■□□□□ 0.88
CD48P09326 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD48P09326 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD48P09326 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD48P09326 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD48P09326 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.54■□□□□ 0.88
CD48P09326 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD48P09326 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.54■□□□□ 0.88
CD48P09326 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms