Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
THBS1P07996 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.26■□□□□ 0.51
THBS1P07996 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
THBS1P07996 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 BX276092.2-201ENST00000417668 665 ntBASIC18.26■□□□□ 0.51
THBS1P07996 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
THBS1P07996 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.26■□□□□ 0.51
THBS1P07996 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.26■□□□□ 0.51
THBS1P07996 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.26■□□□□ 0.51
THBS1P07996 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.26■□□□□ 0.51
THBS1P07996 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.26■□□□□ 0.51
THBS1P07996 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.26■□□□□ 0.51
THBS1P07996 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THBS1P07996 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.25■□□□□ 0.51
THBS1P07996 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.25■□□□□ 0.51
THBS1P07996 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
THBS1P07996 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.25■□□□□ 0.51
THBS1P07996 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.25■□□□□ 0.51
THBS1P07996 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
THBS1P07996 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.25■□□□□ 0.51
THBS1P07996 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.25■□□□□ 0.51
THBS1P07996 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.25■□□□□ 0.51
THBS1P07996 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.25■□□□□ 0.51
THBS1P07996 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.25■□□□□ 0.51
THBS1P07996 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THBS1P07996 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
THBS1P07996 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.24■□□□□ 0.51
THBS1P07996 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
THBS1P07996 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THBS1P07996 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
THBS1P07996 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.24■□□□□ 0.51
THBS1P07996 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THBS1P07996 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THBS1P07996 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.24■□□□□ 0.51
THBS1P07996 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.24■□□□□ 0.51
THBS1P07996 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.24■□□□□ 0.51
THBS1P07996 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.24■□□□□ 0.51
THBS1P07996 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THBS1P07996 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
THBS1P07996 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
THBS1P07996 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.24■□□□□ 0.51
THBS1P07996 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
THBS1P07996 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THBS1P07996 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
THBS1P07996 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 ABHD17AP1-201ENST00000358206 933 ntBASIC18.23■□□□□ 0.51
THBS1P07996 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.23■□□□□ 0.51
THBS1P07996 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
THBS1P07996 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.23■□□□□ 0.51
THBS1P07996 AL121832.2-201ENST00000610979 668 ntBASIC18.23■□□□□ 0.51
THBS1P07996 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.23■□□□□ 0.51
THBS1P07996 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.23■□□□□ 0.51
THBS1P07996 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.23■□□□□ 0.51
THBS1P07996 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
THBS1P07996 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
THBS1P07996 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS1P07996 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS1P07996 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS1P07996 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.22■□□□□ 0.51
THBS1P07996 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS1P07996 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THBS1P07996 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.22■□□□□ 0.51
THBS1P07996 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms