Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.88■□□□□ 0.77
APOA4P06727 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
APOA4P06727 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.88■□□□□ 0.77
APOA4P06727 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.88■□□□□ 0.77
APOA4P06727 MIPEPP3-201ENST00000412105 444 ntBASIC19.88■□□□□ 0.77
APOA4P06727 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.88■□□□□ 0.77
APOA4P06727 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
APOA4P06727 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.88■□□□□ 0.77
APOA4P06727 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.88■□□□□ 0.77
APOA4P06727 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.88■□□□□ 0.77
APOA4P06727 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.88■□□□□ 0.77
APOA4P06727 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APOA4P06727 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
APOA4P06727 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.87■□□□□ 0.77
APOA4P06727 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.87■□□□□ 0.77
APOA4P06727 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.87■□□□□ 0.77
APOA4P06727 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
APOA4P06727 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
APOA4P06727 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOA4P06727 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOA4P06727 AL158211.5-201ENST00000623583 2518 ntBASIC19.86■□□□□ 0.77
APOA4P06727 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.86■□□□□ 0.77
APOA4P06727 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.86■□□□□ 0.77
APOA4P06727 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
APOA4P06727 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOA4P06727 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.86■□□□□ 0.77
APOA4P06727 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
APOA4P06727 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APOA4P06727 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.86■□□□□ 0.77
APOA4P06727 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.86■□□□□ 0.77
APOA4P06727 AL109923.1-201ENST00000618799 583 ntBASIC19.86■□□□□ 0.77
APOA4P06727 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.86■□□□□ 0.77
APOA4P06727 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.86■□□□□ 0.77
APOA4P06727 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.86■□□□□ 0.77
APOA4P06727 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOA4P06727 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOA4P06727 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOA4P06727 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APOA4P06727 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APOA4P06727 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.85■□□□□ 0.77
APOA4P06727 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
APOA4P06727 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
APOA4P06727 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APOA4P06727 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.85■□□□□ 0.77
APOA4P06727 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.85■□□□□ 0.77
APOA4P06727 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APOA4P06727 GUSBP6-202ENST00000438529 1198 ntBASIC19.85■□□□□ 0.77
APOA4P06727 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
APOA4P06727 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.85■□□□□ 0.77
APOA4P06727 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.85■□□□□ 0.77
APOA4P06727 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.85■□□□□ 0.77
APOA4P06727 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
APOA4P06727 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.85■□□□□ 0.77
APOA4P06727 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
APOA4P06727 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APOA4P06727 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.85■□□□□ 0.77
APOA4P06727 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APOA4P06727 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.85■□□□□ 0.77
APOA4P06727 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
APOA4P06727 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.84■□□□□ 0.77
APOA4P06727 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 AC018445.3-201ENST00000624177 1945 ntBASIC19.84■□□□□ 0.77
APOA4P06727 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
APOA4P06727 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
APOA4P06727 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.84■□□□□ 0.77
APOA4P06727 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 MIR4758-201ENST00000577688 71 ntBASIC19.84■□□□□ 0.77
APOA4P06727 AC092118.2-201ENST00000613495 667 ntBASIC19.84■□□□□ 0.77
APOA4P06727 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.84■□□□□ 0.77
APOA4P06727 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
APOA4P06727 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
APOA4P06727 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOA4P06727 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms