Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 AC009237.14-201ENST00000609975 1594 ntBASIC20.15■□□□□ 0.82
HLA-DQB2P05538 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB2P05538 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.14■□□□□ 0.82
HLA-DQB2P05538 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
HLA-DQB2P05538 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HLA-DQB2P05538 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
HLA-DQB2P05538 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 RPS2P52-201ENST00000469610 820 ntBASIC20.14■□□□□ 0.81
HLA-DQB2P05538 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB2P05538 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 AC116351.2-201ENST00000606540 1585 ntBASIC20.13■□□□□ 0.81
HLA-DQB2P05538 AP001271.2-201ENST00000624018 1556 ntBASIC20.13■□□□□ 0.81
HLA-DQB2P05538 AC018553.1-201ENST00000616682 1458 ntBASIC20.13■□□□□ 0.81
HLA-DQB2P05538 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 AC008687.6-201ENST00000596318 630 ntBASIC20.13■□□□□ 0.81
HLA-DQB2P05538 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB2P05538 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.12■□□□□ 0.81
HLA-DQB2P05538 UNC93B4-201ENST00000505679 747 ntBASIC20.12■□□□□ 0.81
HLA-DQB2P05538 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 AC120498.8-201ENST00000614275 531 ntBASIC20.12■□□□□ 0.81
HLA-DQB2P05538 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB2P05538 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms