Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 AC099791.1-201ENST00000416440 715 ntBASIC17.14■□□□□ 0.33
HLA-DQB1P01920 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 BICD1-207ENST00000551848 1962 ntBASIC17.14■□□□□ 0.33
HLA-DQB1P01920 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 AC009237.14-201ENST00000609975 1594 ntBASIC17.14■□□□□ 0.33
HLA-DQB1P01920 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 AL354751.1-201ENST00000412768 1863 ntBASIC17.14■□□□□ 0.33
HLA-DQB1P01920 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DQB1P01920 AC090164.3-201ENST00000610780 2143 ntBASIC17.14■□□□□ 0.33
HLA-DQB1P01920 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.13■□□□□ 0.33
HLA-DQB1P01920 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 AC027682.1-201ENST00000562846 899 ntBASIC17.13■□□□□ 0.33
HLA-DQB1P01920 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 AC018470.1-201ENST00000624790 3129 ntBASIC17.13■□□□□ 0.33
HLA-DQB1P01920 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DQB1P01920 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DQB1P01920 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DQB1P01920 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms