Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TIMP1P01033 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TIMP1P01033 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TIMP1P01033 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP1P01033 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.59■■□□□ 1.05
TIMP1P01033 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP1P01033 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.59■■□□□ 1.05
TIMP1P01033 AC004951.3-201ENST00000418645 1148 ntBASIC21.59■■□□□ 1.05
TIMP1P01033 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.59■■□□□ 1.05
TIMP1P01033 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.59■■□□□ 1.05
TIMP1P01033 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP1P01033 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.59■■□□□ 1.05
TIMP1P01033 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
TIMP1P01033 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.59■■□□□ 1.05
TIMP1P01033 GUSBP5-202ENST00000510805 1989 ntBASIC21.59■■□□□ 1.05
TIMP1P01033 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP1P01033 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.59■■□□□ 1.05
TIMP1P01033 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP1P01033 IER3-202ENST00000376377 1350 ntBASIC21.59■■□□□ 1.05
TIMP1P01033 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.59■■□□□ 1.05
TIMP1P01033 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP1P01033 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TIMP1P01033 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TIMP1P01033 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TIMP1P01033 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.58■■□□□ 1.05
TIMP1P01033 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TIMP1P01033 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.58■■□□□ 1.05
TIMP1P01033 AL450487.1-201ENST00000426799 995 ntBASIC21.58■■□□□ 1.05
TIMP1P01033 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.58■■□□□ 1.05
TIMP1P01033 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.58■■□□□ 1.05
TIMP1P01033 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.58■■□□□ 1.05
TIMP1P01033 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.58■■□□□ 1.05
TIMP1P01033 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TIMP1P01033 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.58■■□□□ 1.04
TIMP1P01033 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
TIMP1P01033 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TIMP1P01033 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.57■■□□□ 1.04
TIMP1P01033 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.57■■□□□ 1.04
TIMP1P01033 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.57■■□□□ 1.04
TIMP1P01033 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.57■■□□□ 1.04
TIMP1P01033 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.57■■□□□ 1.04
TIMP1P01033 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.57■■□□□ 1.04
TIMP1P01033 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.57■■□□□ 1.04
TIMP1P01033 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.57■■□□□ 1.04
TIMP1P01033 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP1P01033 AL031432.5-201ENST00000641059 760 ntBASIC21.57■■□□□ 1.04
TIMP1P01033 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.57■■□□□ 1.04
TIMP1P01033 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
TIMP1P01033 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.56■■□□□ 1.04
TIMP1P01033 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TIMP1P01033 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
TIMP1P01033 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TIMP1P01033 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.56■■□□□ 1.04
TIMP1P01033 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP1P01033 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TIMP1P01033 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TIMP1P01033 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TIMP1P01033 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.56■■□□□ 1.04
TIMP1P01033 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP1P01033 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.56■■□□□ 1.04
TIMP1P01033 AC093458.2-201ENST00000623150 629 ntBASIC21.56■■□□□ 1.04
TIMP1P01033 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TIMP1P01033 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 AC092338.2-201ENST00000568827 1415 ntBASIC21.55■■□□□ 1.04
TIMP1P01033 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TIMP1P01033 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TIMP1P01033 HOMER2P1-201ENST00000455653 964 ntBASIC21.55■■□□□ 1.04
TIMP1P01033 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.55■■□□□ 1.04
TIMP1P01033 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.55■■□□□ 1.04
TIMP1P01033 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.55■■□□□ 1.04
TIMP1P01033 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.55■■□□□ 1.04
TIMP1P01033 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 AC244015.2-201ENST00000616358 1861 ntBASIC21.55■■□□□ 1.04
TIMP1P01033 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.55■■□□□ 1.04
TIMP1P01033 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
TIMP1P01033 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.55■■□□□ 1.04
TIMP1P01033 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
TIMP1P01033 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP1P01033 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.55■■□□□ 1.04
TIMP1P01033 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP1P01033 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP1P01033 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP1P01033 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.54■■□□□ 1.04
TIMP1P01033 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP1P01033 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms