Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE3O75131 SNORA78-201ENST00000459373 127 ntBASIC19.03■□□□□ 0.64
CPNE3O75131 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.03■□□□□ 0.64
CPNE3O75131 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE3O75131 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE3O75131 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
CPNE3O75131 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE3O75131 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE3O75131 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE3O75131 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE3O75131 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CPNE3O75131 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CPNE3O75131 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE3O75131 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE3O75131 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE3O75131 HLA-G-202ENST00000376815 851 ntBASIC19.02■□□□□ 0.64
CPNE3O75131 HLA-G-203ENST00000376818 1127 ntBASIC19.02■□□□□ 0.64
CPNE3O75131 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE3O75131 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE3O75131 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE3O75131 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE3O75131 AC233702.5-201ENST00000584107 538 ntBASIC19.02■□□□□ 0.64
CPNE3O75131 AP001412.1-201ENST00000608405 714 ntBASIC19.02■□□□□ 0.64
CPNE3O75131 AL121829.2-201ENST00000620908 328 ntBASIC19.02■□□□□ 0.64
CPNE3O75131 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE3O75131 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE3O75131 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE3O75131 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE3O75131 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE3O75131 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE3O75131 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.02■□□□□ 0.63
CPNE3O75131 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.02■□□□□ 0.63
CPNE3O75131 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPNE3O75131 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPNE3O75131 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.02■□□□□ 0.63
CPNE3O75131 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CPNE3O75131 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE3O75131 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE3O75131 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.01■□□□□ 0.63
CPNE3O75131 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CPNE3O75131 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CPNE3O75131 RPS2P55-201ENST00000397318 883 ntBASIC19.01■□□□□ 0.63
CPNE3O75131 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPNE3O75131 AC107956.1-201ENST00000494359 873 ntBASIC19.01■□□□□ 0.63
CPNE3O75131 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.01■□□□□ 0.63
CPNE3O75131 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE3O75131 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.01■□□□□ 0.63
CPNE3O75131 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE3O75131 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CPNE3O75131 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CPNE3O75131 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE3O75131 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE3O75131 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19■□□□□ 0.63
CPNE3O75131 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE3O75131 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19■□□□□ 0.63
CPNE3O75131 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE3O75131 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CPNE3O75131 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CPNE3O75131 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19■□□□□ 0.63
CPNE3O75131 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19■□□□□ 0.63
CPNE3O75131 AL121906.2-201ENST00000621597 723 ntBASIC19■□□□□ 0.63
CPNE3O75131 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE3O75131 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19■□□□□ 0.63
CPNE3O75131 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE3O75131 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CPNE3O75131 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CPNE3O75131 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19■□□□□ 0.63
CPNE3O75131 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE3O75131 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE3O75131 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms