Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.81■□□□□ 0.44
PFDN1O60925 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PFDN1O60925 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.81■□□□□ 0.44
PFDN1O60925 CROCCP3-202ENST00000420820 1947 ntBASIC17.81■□□□□ 0.44
PFDN1O60925 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PFDN1O60925 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PFDN1O60925 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.81■□□□□ 0.44
PFDN1O60925 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.81■□□□□ 0.44
PFDN1O60925 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.81■□□□□ 0.44
PFDN1O60925 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PFDN1O60925 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PFDN1O60925 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PFDN1O60925 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PFDN1O60925 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PFDN1O60925 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.8■□□□□ 0.44
PFDN1O60925 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
PFDN1O60925 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.8■□□□□ 0.44
PFDN1O60925 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PFDN1O60925 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 AL354751.1-201ENST00000412768 1863 ntBASIC17.8■□□□□ 0.44
PFDN1O60925 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PFDN1O60925 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PFDN1O60925 AC090164.3-201ENST00000610780 2143 ntBASIC17.79■□□□□ 0.44
PFDN1O60925 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PFDN1O60925 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.79■□□□□ 0.44
PFDN1O60925 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.79■□□□□ 0.44
PFDN1O60925 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PFDN1O60925 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.79■□□□□ 0.44
PFDN1O60925 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PFDN1O60925 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
PFDN1O60925 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
PFDN1O60925 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PFDN1O60925 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.78■□□□□ 0.44
PFDN1O60925 LINC01971-201ENST00000617888 1048 ntBASIC17.78■□□□□ 0.44
PFDN1O60925 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
PFDN1O60925 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PFDN1O60925 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.78■□□□□ 0.44
PFDN1O60925 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PFDN1O60925 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.78■□□□□ 0.44
PFDN1O60925 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.78■□□□□ 0.44
PFDN1O60925 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN1O60925 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN1O60925 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PFDN1O60925 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms