Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 TFP1-202ENST00000475455 1573 ntBASIC20.17■□□□□ 0.82
PRAMEF11O60813 AC073130.3-201ENST00000624389 2278 ntBASIC20.17■□□□□ 0.82
PRAMEF11O60813 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.17■□□□□ 0.82
PRAMEF11O60813 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF11O60813 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PRAMEF11O60813 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF11O60813 AC009237.14-201ENST00000609975 1594 ntBASIC20.17■□□□□ 0.82
PRAMEF11O60813 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEF11O60813 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 KRT18P29-201ENST00000397031 1267 ntBASIC20.16■□□□□ 0.82
PRAMEF11O60813 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF11O60813 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PRAMEF11O60813 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PRAMEF11O60813 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.15■□□□□ 0.82
PRAMEF11O60813 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.15■□□□□ 0.82
PRAMEF11O60813 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.15■□□□□ 0.82
PRAMEF11O60813 RN7SL471P-201ENST00000580476 299 ntBASIC20.15■□□□□ 0.82
PRAMEF11O60813 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF11O60813 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PRAMEF11O60813 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.15■□□□□ 0.82
PRAMEF11O60813 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF11O60813 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.14■□□□□ 0.82
PRAMEF11O60813 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.14■□□□□ 0.82
PRAMEF11O60813 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PRAMEF11O60813 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF11O60813 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF11O60813 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF11O60813 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF11O60813 TMEM179-206ENST00000616017 1645 ntBASIC20.14■□□□□ 0.81
PRAMEF11O60813 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF11O60813 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF11O60813 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAMEF11O60813 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PRAMEF11O60813 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms