Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL13O43927 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CXCL13O43927 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL13O43927 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.78■□□□□ 0.44
CXCL13O43927 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.78■□□□□ 0.44
CXCL13O43927 RPPH1-201ENST00000516869 333 ntBASIC17.78■□□□□ 0.44
CXCL13O43927 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.78■□□□□ 0.44
CXCL13O43927 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.78■□□□□ 0.44
CXCL13O43927 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL13O43927 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.78■□□□□ 0.44
CXCL13O43927 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL13O43927 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CXCL13O43927 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.78■□□□□ 0.44
CXCL13O43927 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL13O43927 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL13O43927 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL13O43927 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CXCL13O43927 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CXCL13O43927 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 LINC01521-201ENST00000504184 1943 ntBASIC17.77■□□□□ 0.44
CXCL13O43927 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCL13O43927 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 GCSHP5-201ENST00000443090 522 ntBASIC17.77■□□□□ 0.44
CXCL13O43927 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCL13O43927 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCL13O43927 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.77■□□□□ 0.44
CXCL13O43927 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CXCL13O43927 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.77■□□□□ 0.44
CXCL13O43927 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.77■□□□□ 0.44
CXCL13O43927 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 AL359736.2-201ENST00000621992 437 ntBASIC17.77■□□□□ 0.44
CXCL13O43927 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL13O43927 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CXCL13O43927 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.77■□□□□ 0.43
CXCL13O43927 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CXCL13O43927 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CXCL13O43927 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CXCL13O43927 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CXCL13O43927 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CXCL13O43927 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CXCL13O43927 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCL13O43927 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCL13O43927 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.76■□□□□ 0.43
CXCL13O43927 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCL13O43927 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCL13O43927 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CXCL13O43927 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.76■□□□□ 0.43
CXCL13O43927 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 KRASP1-201ENST00000407852 552 ntBASIC17.76■□□□□ 0.43
CXCL13O43927 AC239809.2-201ENST00000415381 517 ntBASIC17.76■□□□□ 0.43
CXCL13O43927 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CXCL13O43927 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.76■□□□□ 0.43
CXCL13O43927 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.76■□□□□ 0.43
CXCL13O43927 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CXCL13O43927 FAM197Y4-202ENST00000622692 608 ntBASIC17.76■□□□□ 0.43
CXCL13O43927 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.76■□□□□ 0.43
CXCL13O43927 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 PHGDH-210ENST00000641115 1638 ntBASIC17.76■□□□□ 0.43
CXCL13O43927 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL13O43927 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CXCL13O43927 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.75■□□□□ 0.43
CXCL13O43927 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CXCL13O43927 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CXCL13O43927 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCL13O43927 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 AC099778.1-201ENST00000568593 1911 ntBASIC17.75■□□□□ 0.43
CXCL13O43927 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCL13O43927 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL13O43927 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.75■□□□□ 0.43
CXCL13O43927 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CXCL13O43927 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.75■□□□□ 0.43
CXCL13O43927 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCL13O43927 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.75■□□□□ 0.43
CXCL13O43927 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.75■□□□□ 0.43
CXCL13O43927 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms