Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF9O43307 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF9O43307 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF9O43307 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF9O43307 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 AL050303.2-201ENST00000619798 666 ntBASIC18.31■□□□□ 0.52
ARHGEF9O43307 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF9O43307 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF9O43307 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 AC069152.1-201ENST00000438030 544 ntBASIC18.3■□□□□ 0.52
ARHGEF9O43307 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 AF201337.1-201ENST00000520239 748 ntBASIC18.3■□□□□ 0.52
ARHGEF9O43307 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 DUX4L16-201ENST00000555130 1264 ntBASIC18.3■□□□□ 0.52
ARHGEF9O43307 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 RBM17P2-201ENST00000616397 1405 ntBASIC18.3■□□□□ 0.52
ARHGEF9O43307 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF9O43307 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ARHGEF9O43307 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 PCDHAC2-203ENST00000615316 3011 ntBASIC18.29■□□□□ 0.52
ARHGEF9O43307 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 AL138781.1-201ENST00000566567 1274 ntBASIC18.29■□□□□ 0.52
ARHGEF9O43307 SLC7A5P1-201ENST00000568957 537 ntBASIC18.29■□□□□ 0.52
ARHGEF9O43307 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.29■□□□□ 0.52
ARHGEF9O43307 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF9O43307 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms