Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CLOCKO15516 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.8■□□□□ 0.6
CLOCKO15516 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.8■□□□□ 0.6
CLOCKO15516 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.8■□□□□ 0.6
CLOCKO15516 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.8■□□□□ 0.6
CLOCKO15516 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.8■□□□□ 0.6
CLOCKO15516 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLOCKO15516 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.8■□□□□ 0.6
CLOCKO15516 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.8■□□□□ 0.6
CLOCKO15516 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CLOCKO15516 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
CLOCKO15516 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLOCKO15516 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLOCKO15516 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLOCKO15516 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLOCKO15516 AC093503.3-201ENST00000624917 2352 ntBASIC18.79■□□□□ 0.6
CLOCKO15516 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.79■□□□□ 0.6
CLOCKO15516 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.79■□□□□ 0.6
CLOCKO15516 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.79■□□□□ 0.6
CLOCKO15516 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLOCKO15516 POU5F1P4-201ENST00000413175 1085 ntBASIC18.79■□□□□ 0.6
CLOCKO15516 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.79■□□□□ 0.6
CLOCKO15516 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.79■□□□□ 0.6
CLOCKO15516 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.79■□□□□ 0.6
CLOCKO15516 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.79■□□□□ 0.6
CLOCKO15516 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CLOCKO15516 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLOCKO15516 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.79■□□□□ 0.6
CLOCKO15516 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLOCKO15516 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLOCKO15516 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.79■□□□□ 0.6
CLOCKO15516 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.78■□□□□ 0.6
CLOCKO15516 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLOCKO15516 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.78■□□□□ 0.6
CLOCKO15516 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.78■□□□□ 0.6
CLOCKO15516 AC008175.2-201ENST00000612840 297 ntBASIC18.78■□□□□ 0.6
CLOCKO15516 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLOCKO15516 DPP3P2-201ENST00000416030 1696 ntBASIC18.78■□□□□ 0.6
CLOCKO15516 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLOCKO15516 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLOCKO15516 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CLOCKO15516 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLOCKO15516 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLOCKO15516 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLOCKO15516 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLOCKO15516 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLOCKO15516 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLOCKO15516 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLOCKO15516 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLOCKO15516 BX119927.1-201ENST00000636596 1552 ntBASIC18.77■□□□□ 0.6
CLOCKO15516 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLOCKO15516 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLOCKO15516 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.77■□□□□ 0.6
CLOCKO15516 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.77■□□□□ 0.6
CLOCKO15516 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLOCKO15516 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLOCKO15516 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.77■□□□□ 0.6
CLOCKO15516 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.77■□□□□ 0.6
CLOCKO15516 AC016769.1-201ENST00000409132 1010 ntBASIC18.77■□□□□ 0.6
CLOCKO15516 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.77■□□□□ 0.6
CLOCKO15516 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.77■□□□□ 0.6
CLOCKO15516 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.77■□□□□ 0.6
CLOCKO15516 Z82202.1-201ENST00000623446 1880 ntBASIC18.77■□□□□ 0.6
CLOCKO15516 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLOCKO15516 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLOCKO15516 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CLOCKO15516 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms