Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.27■■□□□ 1
SPTLC1O15269 LINC01023-201ENST00000606054 436 ntBASIC21.27■■□□□ 1
SPTLC1O15269 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.27■■□□□ 1
SPTLC1O15269 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.27■□□□□ 0.99
SPTLC1O15269 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SPTLC1O15269 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.27■□□□□ 0.99
SPTLC1O15269 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SPTLC1O15269 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.26■□□□□ 0.99
SPTLC1O15269 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 NBPF21P-201ENST00000425093 1451 ntBASIC21.26■□□□□ 0.99
SPTLC1O15269 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SPTLC1O15269 GABARAPL3-202ENST00000624044 1851 ntBASIC21.26■□□□□ 0.99
SPTLC1O15269 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.26■□□□□ 0.99
SPTLC1O15269 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.26■□□□□ 0.99
SPTLC1O15269 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SPTLC1O15269 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SPTLC1O15269 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SPTLC1O15269 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.26■□□□□ 0.99
SPTLC1O15269 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.26■□□□□ 0.99
SPTLC1O15269 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.26■□□□□ 0.99
SPTLC1O15269 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.26■□□□□ 0.99
SPTLC1O15269 AL391422.3-201ENST00000603791 2761 ntBASIC21.26■□□□□ 0.99
SPTLC1O15269 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPTLC1O15269 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPTLC1O15269 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SPTLC1O15269 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.25■□□□□ 0.99
SPTLC1O15269 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SPTLC1O15269 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPTLC1O15269 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPTLC1O15269 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.25■□□□□ 0.99
SPTLC1O15269 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SPTLC1O15269 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SPTLC1O15269 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPTLC1O15269 AC211429.1-201ENST00000415277 523 ntBASIC21.25■□□□□ 0.99
SPTLC1O15269 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPTLC1O15269 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPTLC1O15269 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.25■□□□□ 0.99
SPTLC1O15269 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.25■□□□□ 0.99
SPTLC1O15269 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.25■□□□□ 0.99
SPTLC1O15269 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.25■□□□□ 0.99
SPTLC1O15269 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.25■□□□□ 0.99
SPTLC1O15269 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPTLC1O15269 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPTLC1O15269 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 AC116351.2-201ENST00000606540 1585 ntBASIC21.24■□□□□ 0.99
SPTLC1O15269 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SPTLC1O15269 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.24■□□□□ 0.99
SPTLC1O15269 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.24■□□□□ 0.99
SPTLC1O15269 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.24■□□□□ 0.99
SPTLC1O15269 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 REXO1L12P-201ENST00000622156 912 ntBASIC21.24■□□□□ 0.99
SPTLC1O15269 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.24■□□□□ 0.99
SPTLC1O15269 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
SPTLC1O15269 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
SPTLC1O15269 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPTLC1O15269 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.24■□□□□ 0.99
SPTLC1O15269 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SPTLC1O15269 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
SPTLC1O15269 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SPTLC1O15269 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SPTLC1O15269 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
SPTLC1O15269 AC018553.1-201ENST00000616682 1458 ntBASIC21.23■□□□□ 0.99
SPTLC1O15269 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.23■□□□□ 0.99
SPTLC1O15269 LINC01006-201ENST00000333319 2292 ntBASIC21.23■□□□□ 0.99
SPTLC1O15269 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPTLC1O15269 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.22■□□□□ 0.99
SPTLC1O15269 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPTLC1O15269 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SPTLC1O15269 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SPTLC1O15269 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.22■□□□□ 0.99
SPTLC1O15269 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms