Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.18■■□□□ 1.78
APAF1O14727 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.18■■□□□ 1.78
APAF1O14727 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC26.18■■□□□ 1.78
APAF1O14727 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
APAF1O14727 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
APAF1O14727 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
APAF1O14727 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
APAF1O14727 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
APAF1O14727 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.18■■□□□ 1.78
APAF1O14727 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.18■■□□□ 1.78
APAF1O14727 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.18■■□□□ 1.78
APAF1O14727 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.18■■□□□ 1.78
APAF1O14727 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
APAF1O14727 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC26.18■■□□□ 1.78
APAF1O14727 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC26.18■■□□□ 1.78
APAF1O14727 AC018553.1-201ENST00000616682 1458 ntBASIC26.17■■□□□ 1.78
APAF1O14727 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC26.17■■□□□ 1.78
APAF1O14727 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
APAF1O14727 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
APAF1O14727 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
APAF1O14727 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
APAF1O14727 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
APAF1O14727 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC26.17■■□□□ 1.78
APAF1O14727 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC26.17■■□□□ 1.78
APAF1O14727 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
APAF1O14727 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.17■■□□□ 1.78
APAF1O14727 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
APAF1O14727 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
APAF1O14727 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.17■■□□□ 1.78
APAF1O14727 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.17■■□□□ 1.78
APAF1O14727 AC233263.1-201ENST00000578059 224 ntBASIC26.17■■□□□ 1.78
APAF1O14727 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC26.17■■□□□ 1.78
APAF1O14727 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC26.17■■□□□ 1.78
APAF1O14727 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
APAF1O14727 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.17■■□□□ 1.78
APAF1O14727 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
APAF1O14727 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
APAF1O14727 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
APAF1O14727 AC116351.2-201ENST00000606540 1585 ntBASIC26.16■■□□□ 1.78
APAF1O14727 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC26.16■■□□□ 1.78
APAF1O14727 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.16■■□□□ 1.78
APAF1O14727 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
APAF1O14727 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC26.16■■□□□ 1.78
APAF1O14727 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
APAF1O14727 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.16■■□□□ 1.78
APAF1O14727 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.16■■□□□ 1.78
APAF1O14727 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.16■■□□□ 1.78
APAF1O14727 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.16■■□□□ 1.78
APAF1O14727 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.16■■□□□ 1.78
APAF1O14727 GOLGA2P11-201ENST00000562660 1621 ntBASIC26.16■■□□□ 1.78
APAF1O14727 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
APAF1O14727 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
APAF1O14727 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC26.16■■□□□ 1.78
APAF1O14727 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.16■■□□□ 1.78
APAF1O14727 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
APAF1O14727 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
APAF1O14727 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
APAF1O14727 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
APAF1O14727 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
APAF1O14727 POM121L13P-201ENST00000422362 380 ntBASIC26.15■■□□□ 1.78
APAF1O14727 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.15■■□□□ 1.78
APAF1O14727 TSPY20P-201ENST00000450910 630 ntBASIC26.15■■□□□ 1.78
APAF1O14727 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.15■■□□□ 1.78
APAF1O14727 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
APAF1O14727 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.15■■□□□ 1.78
APAF1O14727 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
APAF1O14727 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.15■■□□□ 1.78
APAF1O14727 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC26.15■■□□□ 1.78
APAF1O14727 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 TMEM179-206ENST00000616017 1645 ntBASIC26.14■■□□□ 1.78
APAF1O14727 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC26.14■■□□□ 1.78
APAF1O14727 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.14■■□□□ 1.78
APAF1O14727 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.14■■□□□ 1.78
APAF1O14727 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.14■■□□□ 1.78
APAF1O14727 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.14■■□□□ 1.78
APAF1O14727 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.14■■□□□ 1.78
APAF1O14727 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.14■■□□□ 1.78
APAF1O14727 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
APAF1O14727 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.14■■□□□ 1.78
APAF1O14727 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
APAF1O14727 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC26.14■■□□□ 1.77
APAF1O14727 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.14■■□□□ 1.77
APAF1O14727 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
APAF1O14727 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
APAF1O14727 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
APAF1O14727 AC009237.14-201ENST00000609975 1594 ntBASIC26.13■■□□□ 1.77
APAF1O14727 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
APAF1O14727 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
APAF1O14727 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.13■■□□□ 1.77
APAF1O14727 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
APAF1O14727 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms