Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3FO00303 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
EIF3FO00303 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.44■□□□□ 0.7
EIF3FO00303 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3FO00303 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.44■□□□□ 0.7
EIF3FO00303 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3FO00303 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.44■□□□□ 0.7
EIF3FO00303 AC083880.1-201ENST00000608266 535 ntBASIC19.44■□□□□ 0.7
EIF3FO00303 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3FO00303 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3FO00303 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.44■□□□□ 0.7
EIF3FO00303 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3FO00303 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
EIF3FO00303 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3FO00303 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EIF3FO00303 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.43■□□□□ 0.7
EIF3FO00303 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.43■□□□□ 0.7
EIF3FO00303 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.43■□□□□ 0.7
EIF3FO00303 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.43■□□□□ 0.7
EIF3FO00303 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.43■□□□□ 0.7
EIF3FO00303 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
EIF3FO00303 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.43■□□□□ 0.7
EIF3FO00303 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.43■□□□□ 0.7
EIF3FO00303 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.43■□□□□ 0.7
EIF3FO00303 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.43■□□□□ 0.7
EIF3FO00303 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.43■□□□□ 0.7
EIF3FO00303 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EIF3FO00303 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.43■□□□□ 0.7
EIF3FO00303 AC116351.2-201ENST00000606540 1585 ntBASIC19.43■□□□□ 0.7
EIF3FO00303 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EIF3FO00303 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.42■□□□□ 0.7
EIF3FO00303 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.42■□□□□ 0.7
EIF3FO00303 AC092368.3-202ENST00000574180 1591 ntBASIC19.42■□□□□ 0.7
EIF3FO00303 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EIF3FO00303 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.42■□□□□ 0.7
EIF3FO00303 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.42■□□□□ 0.7
EIF3FO00303 AC098934.4-201ENST00000564127 592 ntBASIC19.42■□□□□ 0.7
EIF3FO00303 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.42■□□□□ 0.7
EIF3FO00303 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.42■□□□□ 0.7
EIF3FO00303 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EIF3FO00303 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
EIF3FO00303 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.41■□□□□ 0.7
EIF3FO00303 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
EIF3FO00303 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
EIF3FO00303 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EIF3FO00303 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EIF3FO00303 PNMA6B-201ENST00000538162 1200 ntBASIC19.41■□□□□ 0.7
EIF3FO00303 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
EIF3FO00303 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EIF3FO00303 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EIF3FO00303 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EIF3FO00303 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
EIF3FO00303 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.4■□□□□ 0.7
EIF3FO00303 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.4■□□□□ 0.7
EIF3FO00303 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EIF3FO00303 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.4■□□□□ 0.7
EIF3FO00303 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.4■□□□□ 0.7
EIF3FO00303 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.4■□□□□ 0.7
EIF3FO00303 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
EIF3FO00303 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
EIF3FO00303 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
EIF3FO00303 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EIF3FO00303 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EIF3FO00303 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EIF3FO00303 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.39■□□□□ 0.7
EIF3FO00303 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.39■□□□□ 0.7
EIF3FO00303 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.39■□□□□ 0.69
EIF3FO00303 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EIF3FO00303 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms