Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.06■□□□□ 0.8
AP3B1O00203 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.06■□□□□ 0.8
AP3B1O00203 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3B1O00203 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3B1O00203 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3B1O00203 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
AP3B1O00203 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.06■□□□□ 0.8
AP3B1O00203 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
AP3B1O00203 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3B1O00203 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
AP3B1O00203 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.06■□□□□ 0.8
AP3B1O00203 CDCA4P2-201ENST00000441182 718 ntBASIC20.06■□□□□ 0.8
AP3B1O00203 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP3B1O00203 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.06■□□□□ 0.8
AP3B1O00203 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3B1O00203 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
AP3B1O00203 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
AP3B1O00203 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
AP3B1O00203 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 AIRN-201ENST00000601203 4374 ntBASIC20.05■□□□□ 0.8
AP3B1O00203 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.05■□□□□ 0.8
AP3B1O00203 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.05■□□□□ 0.8
AP3B1O00203 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.05■□□□□ 0.8
AP3B1O00203 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.05■□□□□ 0.8
AP3B1O00203 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
AP3B1O00203 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
AP3B1O00203 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3B1O00203 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
AP3B1O00203 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.04■□□□□ 0.8
AP3B1O00203 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.04■□□□□ 0.8
AP3B1O00203 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.04■□□□□ 0.8
AP3B1O00203 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
AP3B1O00203 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.04■□□□□ 0.8
AP3B1O00203 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.04■□□□□ 0.8
AP3B1O00203 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.04■□□□□ 0.8
AP3B1O00203 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.04■□□□□ 0.8
AP3B1O00203 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.04■□□□□ 0.8
AP3B1O00203 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3B1O00203 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
AP3B1O00203 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3B1O00203 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
AP3B1O00203 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
AP3B1O00203 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.03■□□□□ 0.8
AP3B1O00203 GPX1P1-201ENST00000388829 606 ntBASIC20.03■□□□□ 0.8
AP3B1O00203 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
AP3B1O00203 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.03■□□□□ 0.8
AP3B1O00203 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.03■□□□□ 0.8
AP3B1O00203 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.03■□□□□ 0.8
AP3B1O00203 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3B1O00203 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3B1O00203 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3B1O00203 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3B1O00203 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3B1O00203 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.03■□□□□ 0.8
AP3B1O00203 TREX1-205ENST00000625293 1783 ntBASIC20.03■□□□□ 0.8
AP3B1O00203 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.02■□□□□ 0.8
AP3B1O00203 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.02■□□□□ 0.8
AP3B1O00203 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.02■□□□□ 0.8
AP3B1O00203 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
AP3B1O00203 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.02■□□□□ 0.8
AP3B1O00203 BX276092.2-201ENST00000417668 665 ntBASIC20.02■□□□□ 0.8
AP3B1O00203 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.02■□□□□ 0.8
AP3B1O00203 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
AP3B1O00203 IKBKGP1-201ENST00000612193 1073 ntBASIC20.02■□□□□ 0.8
AP3B1O00203 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.02■□□□□ 0.8
AP3B1O00203 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.02■□□□□ 0.8
AP3B1O00203 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3B1O00203 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms