Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 IFNL4P1-201ENST00000607083 540 ntBASIC17.97■□□□□ 0.47
COL6A6A6NMZ7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL6A6A6NMZ7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 FAAHP1-202ENST00000446499 1238 ntBASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 VENTXP5-201ENST00000523979 775 ntBASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL6A6A6NMZ7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 PTBP1P-201ENST00000554374 1601 ntBASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 AC004870.1-201ENST00000315132 882 ntBASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 CKBP1-201ENST00000565489 1086 ntBASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 AL512604.3-201ENST00000569583 964 ntBASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.95■□□□□ 0.46
COL6A6A6NMZ7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 NPAP1P7-201ENST00000613027 823 ntBASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 HYMAI.1-201ENST00000620949 238 ntBASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 AL031432.5-201ENST00000641059 760 ntBASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL6A6A6NMZ7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 AL441883.1-201ENST00000566170 1045 ntBASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 AL023973.1-201ENST00000624619 620 ntBASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 AC009078.2-202ENST00000463353 338 ntBASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL6A6A6NMZ7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms