Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 SMG8-203ENST00000578922 2178 ntBASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.8■□□□□ 0.44
TUBAL3A6NHL2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 AL390719.1-204ENST00000412397 1219 ntBASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 SNORA78-201ENST00000459373 127 ntBASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 AC026471.1-201ENST00000564629 3026 ntBASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TUBAL3A6NHL2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 GABARAPL3-202ENST00000624044 1851 ntBASIC17.78■□□□□ 0.44
TUBAL3A6NHL2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 AC073912.3-201ENST00000624414 853 ntBASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TUBAL3A6NHL2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms