Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC128676.1-201ENST00000454392 318 ntBASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MIR2861-201ENST00000636310 90 ntBASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC092368.3-202ENST00000574180 1591 ntBASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC105020.6-201ENST00000621523 1217 ntBASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AL158047.1-201ENST00000445918 881 ntBASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRBV4S1A1TA0A5B7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRBV4S1A1TA0A5B7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms