Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 BX276092.2-201ENST00000417668 665 ntBASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 RAP2CP1-201ENST00000605103 478 ntBASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 AL121832.2-201ENST00000610979 668 ntBASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 AL050303.2-201ENST00000619798 666 ntBASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 PHGDH-210ENST00000641115 1638 ntBASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC006970.2-201ENST00000450065 779 ntBASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 MARS-234ENST00000630571 216 ntTSL 5 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 MARS-235ENST00000630803 183 ntTSL 3 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV6-4A0A1B0GX49 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 GPX1P1-201ENST00000388829 606 ntBASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 AL390719.1-204ENST00000412397 1219 ntBASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 CROCCP5-201ENST00000436658 830 ntBASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC125437.2-201ENST00000625180 2167 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms