Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 AC007322.1-201ENST00000426983 750 ntBASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV12-3A0A0B4J271 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 KRT18P68-201ENST00000392293 1000 ntBASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 CYP2T1P-201ENST00000432607 1285 ntBASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 AC100791.3-201ENST00000617619 330 ntBASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 AC231657.2-201ENST00000624556 255 ntBASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV12-3A0A0B4J271 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV12-3A0A0B4J271 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms