Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 ZNRF2P3-201ENST00000424200 374 ntBASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 AL162412.1-201ENST00000567129 965 ntBASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-7A0A0A0MS04 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 AC010536.3-201ENST00000620306 533 ntBASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-7A0A0A0MS04 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-7A0A0A0MS04 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV6-7A0A0A0MS04 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV6-7A0A0A0MS04 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.58■□□□□ 0.25
TRBV6-7A0A0A0MS04 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.58■□□□□ 0.25
TRBV6-7A0A0A0MS04 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV6-7A0A0A0MS04 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC007322.4-201ENST00000509611 723 ntBASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-7A0A0A0MS04 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-7A0A0A0MS04 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms