Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 OR11H13P-201ENST00000359695 979 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 RNA5SP321-201ENST00000362722 111 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC097721.1-201ENST00000427150 1253 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 ETF1P1-206ENST00000427296 984 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 RPSAP24-201ENST00000461543 873 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 TUBBP11-201ENST00000472255 252 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC128716.1-201ENST00000475129 166 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 PPP1R11P1-201ENST00000486095 376 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 NF1P12-201ENST00000549593 583 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC126323.4-201ENST00000566935 234 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 MIR6726-201ENST00000613751 61 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC016542.2-201ENST00000624201 619 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC073365.1-203ENST00000641055 1992 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 TUBBP10-201ENST00000427668 1301 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC011455.2-201ENST00000599320 3336 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 AC093844.1-201ENST00000514910 1361 ntBASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.16□□□□□ -1.42
THUMPD1Q9NXG2 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 RNA5SP115-201ENST00000411160 107 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 BMP6P1-201ENST00000431230 679 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 NPM1P27-201ENST00000502784 830 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC131392.1-201ENST00000506490 633 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 SETP17-201ENST00000534163 817 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC090115.2-201ENST00000548060 883 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC091133.5-201ENST00000603088 301 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC093635.1-201ENST00000609028 555 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC006328.2-201ENST00000623198 397 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC018692.2-201ENST00000624130 348 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AC012005.2-201ENST00000624333 397 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 AL035425.4-201ENST00000624509 1063 ntBASIC6.15□□□□□ -1.42
THUMPD1Q9NXG2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
THUMPD1Q9NXG2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
THUMPD1Q9NXG2 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.15□□□□□ -1.43
THUMPD1Q9NXG2 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
THUMPD1Q9NXG2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
THUMPD1Q9NXG2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
THUMPD1Q9NXG2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms