Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 AC073916.1-201ENST00000545095 130 ntBASIC5.68□□□□□ -1.5
FAM27BQ5VT28 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 RPL3P13-201ENST00000550415 216 ntBASIC5.68□□□□□ -1.5
FAM27BQ5VT28 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 AC023968.1-201ENST00000560719 475 ntBASIC5.68□□□□□ -1.5
FAM27BQ5VT28 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 AC090616.1-201ENST00000583895 447 ntBASIC5.68□□□□□ -1.5
FAM27BQ5VT28 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 AC135068.11-201ENST00000636378 921 ntBASIC5.68□□□□□ -1.5
FAM27BQ5VT28 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 AC008957.3-201ENST00000624112 2242 ntBASIC5.68□□□□□ -1.5
FAM27BQ5VT28 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 AC009779.8-201ENST00000641684 4384 ntBASIC5.68□□□□□ -1.5
FAM27BQ5VT28 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 CASC19-243ENST00000641588 1546 ntBASIC5.68□□□□□ -1.5
FAM27BQ5VT28 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
FAM27BQ5VT28 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AC067942.1-201ENST00000488045 1493 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 SNORD94-201ENST00000386037 137 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 ARSFP1-201ENST00000398758 477 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AL645939.3-201ENST00000435408 225 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 RPS19P6-201ENST00000441327 433 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 GAPDHP37-201ENST00000442317 968 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AL445991.1-201ENST00000450381 475 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 RPS4XP17-201ENST00000479057 754 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 CASP1P2-201ENST00000526830 1258 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 SYPL1P2-201ENST00000582878 727 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AC012065.3-201ENST00000602736 439 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 LINC02495-203ENST00000636704 242 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AC061975.7-201ENST00000592016 2692 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 RPL31P11-201ENST00000426558 1558 ntBASIC5.67□□□□□ -1.5
FAM27BQ5VT28 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.67□□□□□ -1.5
FAM27BQ5VT28 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AC083862.1-201ENST00000427378 1242 ntBASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 NPM1P23-201ENST00000440193 849 ntBASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AL034369.1-201ENST00000453808 477 ntBASIC5.66□□□□□ -1.5
FAM27BQ5VT28 RN7SL502P-201ENST00000481857 290 ntBASIC5.66□□□□□ -1.5
FAM27BQ5VT28 RN7SL413P-201ENST00000482700 297 ntBASIC5.66□□□□□ -1.5
FAM27BQ5VT28 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AC106800.3-201ENST00000511389 308 ntBASIC5.66□□□□□ -1.5
FAM27BQ5VT28 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.66□□□□□ -1.5
FAM27BQ5VT28 OR9G2P-201ENST00000533326 880 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms