Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CCNA1P78396 AC079949.2-201ENST00000617117 2933 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.52□□□□□ -1.21
CCNA1P78396 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 SPATA31C2-201ENST00000324915 3777 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 AC074141.1-201ENST00000588129 2995 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.52□□□□□ -1.21
CCNA1P78396 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 RPL31P11-201ENST00000426558 1558 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCNA1P78396 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 AL049697.3-201ENST00000406493 982 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 MTND2P12-201ENST00000417560 1252 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.52□□□□□ -1.21
CCNA1P78396 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.52□□□□□ -1.21
CCNA1P78396 EMC3-AS1-205ENST00000438698 534 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.52□□□□□ -1.21
CCNA1P78396 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.52□□□□□ -1.21
CCNA1P78396 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.52□□□□□ -1.21
CCNA1P78396 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.52□□□□□ -1.21
CCNA1P78396 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.52□□□□□ -1.21
CCNA1P78396 AL591767.3-201ENST00000554632 525 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.52□□□□□ -1.21
CCNA1P78396 AP002345.2-201ENST00000609961 904 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.52□□□□□ -1.21
CCNA1P78396 AP000577.1-201ENST00000624366 878 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 LINC02495-203ENST00000636704 242 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 AC119674.1-217ENST00000641942 1086 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCNA1P78396 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.52□□□□□ -1.21
CCNA1P78396 BRD7P1-201ENST00000557705 1915 ntBASIC7.52□□□□□ -1.21
CCNA1P78396 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCNA1P78396 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
CCNA1P78396 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.52□□□□□ -1.21
CCNA1P78396 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCNA1P78396 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CCNA1P78396 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CCNA1P78396 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.52□□□□□ -1.21
CCNA1P78396 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.51□□□□□ -1.21
CCNA1P78396 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
CCNA1P78396 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CCNA1P78396 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.51□□□□□ -1.21
CCNA1P78396 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCNA1P78396 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
CCNA1P78396 RPL5P20-201ENST00000403848 896 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.51□□□□□ -1.21
CCNA1P78396 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.51□□□□□ -1.21
CCNA1P78396 DNAJA1P5-201ENST00000440278 943 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 GAPDHP16-201ENST00000448152 962 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 RBMY3AP-201ENST00000449381 1145 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 OR2AF1P-201ENST00000454899 889 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.51□□□□□ -1.21
CCNA1P78396 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.51□□□□□ -1.21
CCNA1P78396 PABPC1P1-201ENST00000506347 591 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.51□□□□□ -1.21
CCNA1P78396 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.51□□□□□ -1.21
CCNA1P78396 OR9L1P-201ENST00000529493 933 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.51□□□□□ -1.21
CCNA1P78396 SNORA70D-201ENST00000578836 135 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.51□□□□□ -1.21
CCNA1P78396 AC091167.5-201ENST00000605689 894 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 AP001437.1-201ENST00000608783 456 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.51□□□□□ -1.21
CCNA1P78396 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.51□□□□□ -1.21
CCNA1P78396 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.51□□□□□ -1.21
CCNA1P78396 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.51□□□□□ -1.21
CCNA1P78396 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCNA1P78396 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.51□□□□□ -1.21
CCNA1P78396 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.51□□□□□ -1.21
CCNA1P78396 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 342.1 ms