Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.27□□□□□ -1.09
COL15A1P39059 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
COL15A1P39059 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
COL15A1P39059 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.27□□□□□ -1.09
COL15A1P39059 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.26□□□□□ -1.09
COL15A1P39059 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC8.26□□□□□ -1.09
COL15A1P39059 AC104581.5-201ENST00000624171 7141 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.26□□□□□ -1.09
COL15A1P39059 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.26□□□□□ -1.09
COL15A1P39059 LYPLA1P3-201ENST00000402650 695 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.26□□□□□ -1.09
COL15A1P39059 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 AC112492.2-201ENST00000432774 1030 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC8.26□□□□□ -1.09
COL15A1P39059 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.26□□□□□ -1.09
COL15A1P39059 AL359839.1-201ENST00000451975 1160 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 RBBP4P1-201ENST00000502424 1276 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AC139272.1-201ENST00000505516 640 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AC131392.1-201ENST00000506490 633 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AC083906.1-201ENST00000509298 406 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AC036111.2-201ENST00000533247 901 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.26□□□□□ -1.09
COL15A1P39059 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC8.26□□□□□ -1.09
COL15A1P39059 AC007448.1-201ENST00000582714 234 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AP005136.2-201ENST00000583253 1049 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.26□□□□□ -1.09
COL15A1P39059 AL157899.1-201ENST00000604110 936 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AC073046.2-201ENST00000604756 527 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 AC130448.2-201ENST00000624082 374 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
COL15A1P39059 HSPD1P4-201ENST00000547203 1702 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 CDY10P-201ENST00000452415 1567 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.26□□□□□ -1.09
COL15A1P39059 LYARP1-201ENST00000436977 1501 ntBASIC8.26□□□□□ -1.09
COL15A1P39059 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.26□□□□□ -1.09
COL15A1P39059 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
COL15A1P39059 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.26□□□□□ -1.09
COL15A1P39059 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
COL15A1P39059 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
COL15A1P39059 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 HMGN1P20-201ENST00000411849 300 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 AC066692.1-201ENST00000421721 457 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
COL15A1P39059 RPL23AP85-201ENST00000421838 433 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.25□□□□□ -1.09
COL15A1P39059 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.25□□□□□ -1.09
COL15A1P39059 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.25□□□□□ -1.09
COL15A1P39059 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.25□□□□□ -1.09
COL15A1P39059 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
COL15A1P39059 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.25□□□□□ -1.09
COL15A1P39059 RPL12P30-201ENST00000488389 499 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.25□□□□□ -1.09
COL15A1P39059 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.25□□□□□ -1.09
COL15A1P39059 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.25□□□□□ -1.09
COL15A1P39059 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.25□□□□□ -1.09
COL15A1P39059 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 AC008507.3-201ENST00000585753 472 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 MIR6085-201ENST00000618314 110 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 AC026124.2-201ENST00000621847 656 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 MTCO1P25-201ENST00000414449 1799 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.25□□□□□ -1.09
COL15A1P39059 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
COL15A1P39059 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 MAPK10-323ENST00000641493 3207 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
COL15A1P39059 AC007406.5-201ENST00000570140 3170 ntBASIC8.25□□□□□ -1.09
COL15A1P39059 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
COL15A1P39059 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
COL15A1P39059 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms