Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL096800.1-201ENST00000405326 893 ntBASIC8.94□□□□□ -0.98
RXRBP28702 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.94□□□□□ -0.98
RXRBP28702 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.94□□□□□ -0.98
RXRBP28702 MTCO2P20-201ENST00000437339 673 ntBASIC8.94□□□□□ -0.98
RXRBP28702 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC8.94□□□□□ -0.98
RXRBP28702 GAPDHP33-201ENST00000443168 1013 ntBASIC8.94□□□□□ -0.98
RXRBP28702 FCF1P7-201ENST00000451185 558 ntBASIC8.94□□□□□ -0.98
RXRBP28702 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 MEF2AP1-201ENST00000454867 863 ntBASIC8.94□□□□□ -0.98
RXRBP28702 RN7SL799P-201ENST00000475891 298 ntBASIC8.94□□□□□ -0.98
RXRBP28702 RPL7AP23-201ENST00000482625 776 ntBASIC8.94□□□□□ -0.98
RXRBP28702 RPL12P30-201ENST00000488389 499 ntBASIC8.94□□□□□ -0.98
RXRBP28702 MTND1P22-201ENST00000510572 951 ntBASIC8.94□□□□□ -0.98
RXRBP28702 TMEM97P2-201ENST00000517841 403 ntBASIC8.94□□□□□ -0.98
RXRBP28702 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.94□□□□□ -0.98
RXRBP28702 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.94□□□□□ -0.98
RXRBP28702 DUXAP5-201ENST00000529668 529 ntBASIC8.94□□□□□ -0.98
RXRBP28702 HIGD1AP5-201ENST00000529959 259 ntBASIC8.94□□□□□ -0.98
RXRBP28702 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC8.94□□□□□ -0.98
RXRBP28702 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC8.94□□□□□ -0.98
RXRBP28702 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC8.94□□□□□ -0.98
RXRBP28702 MIR4701-201ENST00000583094 63 ntBASIC8.94□□□□□ -0.98
RXRBP28702 AC091057.2-201ENST00000602594 792 ntBASIC8.94□□□□□ -0.98
RXRBP28702 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC8.94□□□□□ -0.98
RXRBP28702 AL355333.1-201ENST00000605632 279 ntBASIC8.94□□□□□ -0.98
RXRBP28702 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.94□□□□□ -0.98
RXRBP28702 U1.41-201ENST00000617626 165 ntBASIC8.94□□□□□ -0.98
RXRBP28702 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8.94□□□□□ -0.98
RXRBP28702 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.94□□□□□ -0.98
RXRBP28702 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.94□□□□□ -0.98
RXRBP28702 AL354854.1-201ENST00000455940 1363 ntBASIC8.94□□□□□ -0.98
RXRBP28702 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.94□□□□□ -0.98
RXRBP28702 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
RXRBP28702 Z83820.1-201ENST00000456978 1499 ntBASIC8.94□□□□□ -0.98
RXRBP28702 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
RXRBP28702 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
RXRBP28702 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.94□□□□□ -0.98
RXRBP28702 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 TRIM53BP-201ENST00000532912 1720 ntBASIC8.94□□□□□ -0.98
RXRBP28702 OR52K3P-202ENST00000641797 1729 ntBASIC8.94□□□□□ -0.98
RXRBP28702 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
RXRBP28702 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
RXRBP28702 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 RNU1-19P-201ENST00000363306 165 ntBASIC8.93□□□□□ -0.98
RXRBP28702 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC8.93□□□□□ -0.98
RXRBP28702 RPL21P50-201ENST00000417698 477 ntBASIC8.93□□□□□ -0.98
RXRBP28702 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.93□□□□□ -0.98
RXRBP28702 FTH1P5-201ENST00000425761 545 ntBASIC8.93□□□□□ -0.98
RXRBP28702 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC8.93□□□□□ -0.98
RXRBP28702 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.93□□□□□ -0.98
RXRBP28702 AC092685.1-201ENST00000447960 1243 ntBASIC8.93□□□□□ -0.98
RXRBP28702 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC8.93□□□□□ -0.98
RXRBP28702 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.93□□□□□ -0.98
RXRBP28702 RPS27AP2-201ENST00000457576 465 ntBASIC8.93□□□□□ -0.98
RXRBP28702 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 AC117525.1-201ENST00000515228 503 ntBASIC8.93□□□□□ -0.98
RXRBP28702 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 AC068305.2-201ENST00000550567 1205 ntBASIC8.93□□□□□ -0.98
RXRBP28702 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 AL445383.1-201ENST00000554689 874 ntBASIC8.93□□□□□ -0.98
RXRBP28702 ZNF971P-201ENST00000562068 1249 ntBASIC8.93□□□□□ -0.98
RXRBP28702 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.93□□□□□ -0.98
RXRBP28702 MRPS21P8-201ENST00000569196 235 ntBASIC8.93□□□□□ -0.98
RXRBP28702 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 AL445435.1-201ENST00000604232 665 ntBASIC8.93□□□□□ -0.98
RXRBP28702 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC8.93□□□□□ -0.98
RXRBP28702 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 AL445984.1-201ENST00000637834 659 ntBASIC8.93□□□□□ -0.98
RXRBP28702 PSMC1P6-201ENST00000477233 1319 ntBASIC8.93□□□□□ -0.98
RXRBP28702 AL358913.2-201ENST00000553881 1548 ntBASIC8.93□□□□□ -0.98
RXRBP28702 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.93□□□□□ -0.98
RXRBP28702 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.93□□□□□ -0.98
RXRBP28702 AC012513.3-201ENST00000623250 2116 ntBASIC8.93□□□□□ -0.98
RXRBP28702 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.93□□□□□ -0.98
RXRBP28702 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RXRBP28702 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
RXRBP28702 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.92□□□□□ -0.98
RXRBP28702 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RXRBP28702 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms