Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
POLR2AP24928 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
POLR2AP24928 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.54□□□□□ -1.2
POLR2AP24928 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.54□□□□□ -1.2
POLR2AP24928 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
POLR2AP24928 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC7.54□□□□□ -1.2
POLR2AP24928 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
POLR2AP24928 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.54□□□□□ -1.2
POLR2AP24928 DEFA11P-201ENST00000446470 261 ntBASIC7.54□□□□□ -1.2
POLR2AP24928 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.54□□□□□ -1.2
POLR2AP24928 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.54□□□□□ -1.2
POLR2AP24928 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.54□□□□□ -1.2
POLR2AP24928 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.54□□□□□ -1.2
POLR2AP24928 AC009237.12-201ENST00000604755 742 ntBASIC7.54□□□□□ -1.2
POLR2AP24928 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.54□□□□□ -1.2
POLR2AP24928 AC131009.3-201ENST00000621809 287 ntBASIC7.54□□□□□ -1.2
POLR2AP24928 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.54□□□□□ -1.2
POLR2AP24928 CTH-203ENST00000411986 2044 ntTSL 2 BASIC7.54□□□□□ -1.2
POLR2AP24928 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.54□□□□□ -1.2
POLR2AP24928 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.54□□□□□ -1.2
POLR2AP24928 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
POLR2AP24928 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.54□□□□□ -1.2
POLR2AP24928 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 RNA5SP500-201ENST00000364486 119 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 U3.43-201ENST00000410734 213 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 BX284632.2-201ENST00000421091 399 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AL512605.1-202ENST00000441919 381 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AC016908.1-201ENST00000442571 1219 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 AL359955.2-201ENST00000445380 353 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 RN7SL326P-201ENST00000477493 296 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AC026826.1-201ENST00000493002 361 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 MTND6P16-201ENST00000504006 520 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 AC091768.1-201ENST00000609258 930 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AC069234.4-201ENST00000621276 412 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AL136228.1-201ENST00000622221 319 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 OR4C1P-202ENST00000641065 1569 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
POLR2AP24928 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
POLR2AP24928 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
POLR2AP24928 RN7SKP293-201ENST00000411389 296 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.53□□□□□ -1.2
POLR2AP24928 AC244452.1-201ENST00000413798 141 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.53□□□□□ -1.2
POLR2AP24928 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 AC083906.1-201ENST00000509298 406 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 SNORA48.9-201ENST00000516419 162 ntBASIC7.53□□□□□ -1.2
POLR2AP24928 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC7.53□□□□□ -1.2
POLR2AP24928 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.53□□□□□ -1.2
POLR2AP24928 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms